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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0370000 |
| Transcript ID | LotjaGi3g1v0370000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9ASR1|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr|G7IH34|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75657630..75661480) extracted from Lotus japonicus Gifu genome v1.2.
AACCAACAATGAAATTGCTGATTTGGTGCGAAAGTTGGAAACAACGCATACACCAAACAATTTCTCGAAACATGCCTCAC TTTACTTGCAATACACGCCACTTCATATAAAAATAAGGTGTCCAAGGCACTTTAATAATGATATATTGAAGAAGATCTCA AATTTAAATAACTATGTAGAAATTTTGTAATAATAAAACCAAAAAGCAATCTTTTCAGTAAGATATATATTTCATTTTTA TATCGTAAAAGATTTGATTTGATTTTGTATTTTTCTCAGTTTCCGCCAATCTCCCCCACTATAAATAGCCATTCACCGCT CTTTCACTCTTTCACAAACCATCATTCAATTCAATTCTCTGTTCCAAACCCTTTGCTTGCTTCTGCGAATCACGTTTTCT CTTTTTGAACTTTGAATCGTTTCTTTTTGAGGTTTGAAATTCAATTTTTGTTGCCAATTTAGTTTGTTAGTTCAATTTTC TTTCTGCATGTGTTATTGGATCGTCACTGATTTTGCATACTGAATCTGTTCATTGTTGATGTTTTCAGATTCAGAGTTAC ATCTTCTTCTTTGTGACGAATTAGGACCAGTCAAGATGGTGAGTCAACACGCTTTTTTCTTTCTTTTTAATTTAATTTGT TTCTTGCGTTAATGGATGCTAAGAGAAACTGGTTTATCTTGTGCAGGTGAAGTTTACGGCCGAAGAACTTCGGCGGAATA TGGACCTCAAACACAATATCAGGAATATGTCTGTTATTGCTCATGTTGATCATGGTATGCTATTACTATTCTTGGCTCAG TTTATGTTATCTGCACCTTTATTTGATTTAGAACATTCTTCAAAGTTTTTGTGAATTTGACTATTTTGCAACTGATAGTC AACCCTTGACAATGTAGTTCAGTAGTTGTTTAGGTTTAGCCTTTGCATCTTTGTGGTAGAAATTAAAATTTTTCAAGATT TCTTTCAATTTCTGATCTTTGATCTCTTATACTATATATCATAATAATGAGAAATTGCTGTATGTTATGCAATACCCACC CAAGAAAAGCATGGTAGCTCAATTATAGTACATGACAGGGCTAATTGAAAATTTACAAAGACAATCTGTACTCGTGCTTT TTCGTTTTCGTAGTTAATAGAATTTTCCTATCATTATTGAGATTTTTTTGTAGATATTACTACAGTATTTTAATTAGTTT CTGGAATTGTTGCAGGGAAGTCAACTCTCACTGATTCTCTGGTGGCTGCTGCGGGTATTATTGCACAAGAGAATGCAGGA GATGTTAGGATGACAGATACCCGTGCAGATGAAGCTGAGCGCGGTATAACAATCAAGTCCACTGGTATCTCTCTTTACTA CGAGATGAGTGATGAGGATTTGAAGGACTACAAGGGAGAACGTGAAGGGAATCAGTATCTGATTAATCTCATTGACTCAC CCGGACATGTTGATTTCTCATCTGAGGTCACTGCTGCACTTCGTATCACTGATGGAGCGCTTGTGGTGGTGGATTGTGTT GAGGGTGTTTGTGTCCAAACAGAGACTGTTCTGAGACAGGCCCTTGGAGAAAGGATTAGGCCTGTGTTGACTGTGAACAA GATGGATAGGTGCTTCCTTGAGTTGCAACTTGATGCAGAGGAGGCATACCTTACCTTTCAGAGGGTTATTGAGAGTGCAA ATGTCATCATGGCTACCTATGAAGATGCTCTACTTGGTGATGTTCAGGTGTATCCTGAAAAGGGAACTGTTGCTTTCTCT GCTGGTTTACATGGATGGGCTTTTACCCTGACCAATTTTGCAAAGATGTATGCTTCAAAGTTTGGAGTGGATGAGGCGAA GATGATGACCAGGCTTTGGGGTGAAAATTTCTTTGACCCTGCTACCAAAAAGTGGACCAACAAGCACACTGGAACTTCTA CTTGTAAACGTGGGTTTGTCCAGTTCTGCTATGAACCAATCAAGAAGATTATTGAACTTTGTATGAATGACCAGAAGGAT AAGTTGTGGCCCATGTTGCCAAAGCTTGGGGTGAACTTGAAGTCAGAGGAGAAGGAGTTGACCGGAAAGGCTTTGATGAA GCGTGTCATGCAGAGCTGGCTCCCAGCAAGCAGTGCCCTTCTTGAGATGATGATATTTCATCTACCTTCCCCTGCCAAGG CTCAAAGATATCGCGTCGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGACCCT GAAGGACCTCTGATGCTTTATGTCTCAAAGATGATTCCAGCACCTGATAAGGGAAGGTTTTTTGCTTTTGGCCGTGTCTT CTCTGGTAAGGTCTCAACTGGTATGAAGGTCAGAATCATGGGACCAAATTATGTCCCTGGGGAGAAGAAGGACCTATATG TCAAGAGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTTGAGCATGTCCCTTGTGGAAACACAGTT GCCATGGTGGGTTTGGATCAGTTTATTACCAAGAATGCCACTTTAACGAACGAGAAAGAAGTCGATGCACATCCTATTCG GGCCATGAAGTTTTCTGTGTCACCTGTGGTGAGTGTGGCTGTTACATGCAAGATTGCATCAGAGCTTCCTAAGCTTGTTG AAGGCCTGAAACGGTTAGCAAAGTCAGACCCCATGGTGGTGTGTACAATTTCAGAGACTGGAGAACACATCATAGCGGCT GCTGGTGAGCTGCATCTTGAAATCTGCTTGAAGGACTTGCAGGATGATTTCATGAATGGAGCAGAGATTACAAAATCTGA ACCTATTGTCTCCTTCCGCGAAACCGTGTTTGAGAAATCCTGTCGTACCGTGATGAGCAAGTCACCTAACAAACACAACC GTCTGTACATTGAAGCAAGGCCAATGGAGGATGGTCTTGCAGAGGCCATTGATGATGGAAAGATAGGACCAAGGGATGAC CCCAAAACTCGTTCTAAGATACTGTCTGAAGAGTTTGGTTGGGACAAGGATCTTGCCAAGAAAATATGGTGCTTTGGTCC TGAGACAACTGGACCCAACATGGTGGTAGATACATGCAAGGGTGTTCAGTATCTGAGTGAAATCAAGGACTCAGTGGTTG CTGGGTTTCAGATAGCATCAAAAGAAGGTCCATTGGCTGATGAGAACATGAGAGGAGTTTGCTTTGAGATTTGTGATGTT GTTCTGCATGCTGATGCCATTCACAGAGGAGGAGGGCAGATCATTCCAACTGCTAGAAGGGTGTTCTATGCTGCGACGCT GACGGCGAAGCCGAGACTTTTGGAGCCTGTGTATCTGGTAGAAATACAGTCACCAGAACAGGCTCTTGGTGGAATATATA GTGTTCTTAACCAGAGAAGAGGGCACGTGTTTGAGGAAATCCAGAGGCCTGGAACCCCACTTTACAATGTTAAGGCATAC TTGCCTGTTATTGAGTCATTCAACTTCAATGAATTACTGAGGCAACAAACTGCAGGACAAGCTTTCCCACAGTTGGTGTT TGATCACTGGGATATGGTGCCATCTGATCCACTGGAACCTGGAACTCCTGCTGCTGTGCGTGTTGCTGAGATCAGGCGAA AGAAAGGCCTTAAAGAACAAATGACGCCTCTCTCTGAGTTTGAGGATAGGCTTTGAAGTGTCAACGAGTTACCTTAGTAC CAAATTTTGCATAGATTTCTTTTTGATTCCATTTTTTCCTAGTTTTCCGTTTTTGTTTCATGTTATTCTCTTTTTGCAAT AGAGCTCAAACTTAATATACCAATGATTTTAATTGTAATTTCTCAGTATTACTGTCCTACACTGCCAATGGTCTCTCTCT CTCTCTCTCTC
CDS sequence (LotjaGi3g1v0370000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCAGATTCAGAGTTACATCTTCTTCTTTGTGACGAATTAGGACCAGTCAAGATGGTGAAGTTTACGGCCGAAGA ACTTCGGCGGAATATGGACCTCAAACACAATATCAGGAATATGTCTGTTATTGCTCATGTTGATCATGGGAAGTCAACTC TCACTGATTCTCTGGTGGCTGCTGCGGGTATTATTGCACAAGAGAATGCAGGAGATGTTAGGATGACAGATACCCGTGCA GATGAAGCTGAGCGCGGTATAACAATCAAGTCCACTGGTATCTCTCTTTACTACGAGATGAGTGATGAGGATTTGAAGGA CTACAAGGGAGAACGTGAAGGGAATCAGTATCTGATTAATCTCATTGACTCACCCGGACATGTTGATTTCTCATCTGAGG TCACTGCTGCACTTCGTATCACTGATGGAGCGCTTGTGGTGGTGGATTGTGTTGAGGGTGTTTGTGTCCAAACAGAGACT GTTCTGAGACAGGCCCTTGGAGAAAGGATTAGGCCTGTGTTGACTGTGAACAAGATGGATAGGTGCTTCCTTGAGTTGCA ACTTGATGCAGAGGAGGCATACCTTACCTTTCAGAGGGTTATTGAGAGTGCAAATGTCATCATGGCTACCTATGAAGATG CTCTACTTGGTGATGTTCAGGTGTATCCTGAAAAGGGAACTGTTGCTTTCTCTGCTGGTTTACATGGATGGGCTTTTACC CTGACCAATTTTGCAAAGATGTATGCTTCAAAGTTTGGAGTGGATGAGGCGAAGATGATGACCAGGCTTTGGGGTGAAAA TTTCTTTGACCCTGCTACCAAAAAGTGGACCAACAAGCACACTGGAACTTCTACTTGTAAACGTGGGTTTGTCCAGTTCT GCTATGAACCAATCAAGAAGATTATTGAACTTTGTATGAATGACCAGAAGGATAAGTTGTGGCCCATGTTGCCAAAGCTT GGGGTGAACTTGAAGTCAGAGGAGAAGGAGTTGACCGGAAAGGCTTTGATGAAGCGTGTCATGCAGAGCTGGCTCCCAGC AAGCAGTGCCCTTCTTGAGATGATGATATTTCATCTACCTTCCCCTGCCAAGGCTCAAAGATATCGCGTCGAGAATTTGT ACGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGACCCTGAAGGACCTCTGATGCTTTATGTCTCA AAGATGATTCCAGCACCTGATAAGGGAAGGTTTTTTGCTTTTGGCCGTGTCTTCTCTGGTAAGGTCTCAACTGGTATGAA GGTCAGAATCATGGGACCAAATTATGTCCCTGGGGAGAAGAAGGACCTATATGTCAAGAGTGTTCAGAGAACTGTCATTT GGATGGGAAAGAAGCAAGAAACTGTTGAGCATGTCCCTTGTGGAAACACAGTTGCCATGGTGGGTTTGGATCAGTTTATT ACCAAGAATGCCACTTTAACGAACGAGAAAGAAGTCGATGCACATCCTATTCGGGCCATGAAGTTTTCTGTGTCACCTGT GGTGAGTGTGGCTGTTACATGCAAGATTGCATCAGAGCTTCCTAAGCTTGTTGAAGGCCTGAAACGGTTAGCAAAGTCAG ACCCCATGGTGGTGTGTACAATTTCAGAGACTGGAGAACACATCATAGCGGCTGCTGGTGAGCTGCATCTTGAAATCTGC TTGAAGGACTTGCAGGATGATTTCATGAATGGAGCAGAGATTACAAAATCTGAACCTATTGTCTCCTTCCGCGAAACCGT GTTTGAGAAATCCTGTCGTACCGTGATGAGCAAGTCACCTAACAAACACAACCGTCTGTACATTGAAGCAAGGCCAATGG AGGATGGTCTTGCAGAGGCCATTGATGATGGAAAGATAGGACCAAGGGATGACCCCAAAACTCGTTCTAAGATACTGTCT GAAGAGTTTGGTTGGGACAAGGATCTTGCCAAGAAAATATGGTGCTTTGGTCCTGAGACAACTGGACCCAACATGGTGGT AGATACATGCAAGGGTGTTCAGTATCTGAGTGAAATCAAGGACTCAGTGGTTGCTGGGTTTCAGATAGCATCAAAAGAAG GTCCATTGGCTGATGAGAACATGAGAGGAGTTTGCTTTGAGATTTGTGATGTTGTTCTGCATGCTGATGCCATTCACAGA GGAGGAGGGCAGATCATTCCAACTGCTAGAAGGGTGTTCTATGCTGCGACGCTGACGGCGAAGCCGAGACTTTTGGAGCC TGTGTATCTGGTAGAAATACAGTCACCAGAACAGGCTCTTGGTGGAATATATAGTGTTCTTAACCAGAGAAGAGGGCACG TGTTTGAGGAAATCCAGAGGCCTGGAACCCCACTTTACAATGTTAAGGCATACTTGCCTGTTATTGAGTCATTCAACTTC AATGAATTACTGAGGCAACAAACTGCAGGACAAGCTTTCCCACAGTTGGTGTTTGATCACTGGGATATGGTGCCATCTGA TCCACTGGAACCTGGAACTCCTGCTGCTGTGCGTGTTGCTGAGATCAGGCGAAAGAAAGGCCTTAAAGAACAAATGACGC CTCTCTCTGAGTTTGAGGATAGGCTTTGA
Protein sequence (LotjaGi3g1v0370000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSDSELHLLLCDELGPVKMVKFTAEELRRNMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQENAGDVRMTDTRA DEAERGITIKSTGISLYYEMSDEDLKDYKGEREGNQYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTET VLRQALGERIRPVLTVNKMDRCFLELQLDAEEAYLTFQRVIESANVIMATYEDALLGDVQVYPEKGTVAFSAGLHGWAFT LTNFAKMYASKFGVDEAKMMTRLWGENFFDPATKKWTNKHTGTSTCKRGFVQFCYEPIKKIIELCMNDQKDKLWPMLPKL GVNLKSEEKELTGKALMKRVMQSWLPASSALLEMMIFHLPSPAKAQRYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVS KMIPAPDKGRFFAFGRVFSGKVSTGMKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEHVPCGNTVAMVGLDQFI TKNATLTNEKEVDAHPIRAMKFSVSPVVSVAVTCKIASELPKLVEGLKRLAKSDPMVVCTISETGEHIIAAAGELHLEIC LKDLQDDFMNGAEITKSEPIVSFRETVFEKSCRTVMSKSPNKHNRLYIEARPMEDGLAEAIDDGKIGPRDDPKTRSKILS EEFGWDKDLAKKIWCFGPETTGPNMVVDTCKGVQYLSEIKDSVVAGFQIASKEGPLADENMRGVCFEICDVVLHADAIHR GGGQIIPTARRVFYAATLTAKPRLLEPVYLVEIQSPEQALGGIYSVLNQRRGHVFEEIQRPGTPLYNVKAYLPVIESFNF NELLRQQTAGQAFPQLVFDHWDMVPSDPLEPGTPAAVRVAEIRRKKGLKEQMTPLSEFEDRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 862 | 843 | 0.0 | – | |
| PANTHER | 20 | 862 | 843 | 0.0 | – | |
| SUPERFAMILY | 23 | 360 | 338 | 1.66E-106 | ||
| Gene3D | 32 | 361 | 330 | 1.8E-188 | – | |
| ProSiteProfiles | 36 | 363 | 328 | 53.643 | ||
| Pfam | 36 | 361 | 326 | 7.6E-65 | ||
| CDD | 39 | 249 | 211 | 4.53139E-122 | – | |
| TIGRFAM | 39 | 188 | 150 | 1.1E-16 | ||
| PRINTS | 40 | 53 | 14 | 4.4E-14 | ||
| ProSitePatterns | 77 | 92 | 16 | - | ||
| PRINTS | 84 | 92 | 9 | 4.4E-14 | ||
| Gene3D | 86 | 488 | 403 | 1.8E-188 | – | |
| PRINTS | 120 | 130 | 11 | 4.4E-14 | ||
| PRINTS | 136 | 147 | 12 | 4.4E-14 | ||
| PRINTS | 172 | 181 | 10 | 4.4E-14 | ||
| Gene3D | 241 | 345 | 105 | 1.8E-188 | – | |
| SUPERFAMILY | 361 | 495 | 135 | 6.41E-42 | ||
| CDD | 394 | 489 | 96 | 4.64244E-43 | – | |
| Pfam | 413 | 486 | 74 | 5.2E-12 | ||
| SUPERFAMILY | 503 | 579 | 77 | 4.68E-17 | ||
| Gene3D | 504 | 582 | 79 | 5.6E-31 | – | |
| Pfam | 505 | 569 | 65 | 3.7E-11 | ||
| CDD | 514 | 578 | 65 | 2.56687E-29 | – | |
| CDD | 578 | 750 | 173 | 3.89757E-99 | – | |
| SUPERFAMILY | 581 | 745 | 165 | 3.54E-66 | ||
| Gene3D | 584 | 848 | 265 | 4.6E-121 | – | |
| Gene3D | 590 | 852 | 263 | 4.6E-121 | ||
| SMART | 624 | 741 | 118 | 1.8E-26 | ||
| Pfam | 629 | 741 | 113 | 3.7E-31 | ||
| SMART | 743 | 832 | 90 | 6.8E-18 | ||
| Pfam | 743 | 829 | 87 | 1.5E-19 | ||
| SUPERFAMILY | 746 | 855 | 110 | 3.31E-28 | ||
| CDD | 746 | 825 | 80 | 4.27391E-48 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0370000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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