Domain Predictions — View

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cd16268

Source: CDD

Description

EF2_II

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 19

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0321400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|A0A0B2R210\|A0A0B2R210_GLYSO Elongation factor 2; Found in the gene: LotjaGi1g1v0321400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi1g1v0321400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|A0A0B2R210\|A0A0B2R210_GLYSO Elongation factor 2; Found in the gene: LotjaGi1g1v0321400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi1g1v0321400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|A0A0B2R210\|A0A0B2R210_GLYSO Elongation factor 2; Found in the gene: LotjaGi1g1v0321400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi1g1v0321400.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0321400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi1g1v0321400.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0321400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 cd01681 cd04096 cd16261 cd16268	37
LotjaGi1g1v0645600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT3G22980.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q7Z2Z2\|EFL1_HUMAN Elongation factor-like GTPase 1; TrEMBL-Plants: tr\|A0A0L9UTQ7\|A0A0L9UTQ7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0645600	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR009000 IPR014721 IPR020568 IPR027417 IPR035647 PF00009 PF00679 PF03144 PR00315 PS51722 PTHR42908 PTHR42908:SF3 SM00838 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16268	32
LotjaGi1g1v0645600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT3G22980.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q7Z2Z2\|EFL1_HUMAN Elongation factor-like GTPase 1; TrEMBL-Plants: tr\|A0A0L9UTQ7\|A0A0L9UTQ7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0645600	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR009000 IPR014721 IPR020568 IPR027417 IPR035647 PF00009 PF00679 PF03144 PR00315 PS51722 PTHR42908 PTHR42908:SF3 SM00838 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16268	32
LotjaGi3g1v0139100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0139100	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0139100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0139100	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0139100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0139100	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 cd01681 cd04096 cd16261 cd16268	37
LotjaGi3g1v0370000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 cd01681 cd04096 cd16261 cd16268	37
LotjaGi3g1v0370000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 cd01681 cd04096 cd16261 cd16268	37
LotjaGi3g1v0370300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1KU21\|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370300.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|I1MJ86\|I1MJ86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF20 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16268	CDD	1	5.26