Domain Predictions — View

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SSF82861

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016020 View details of GO:0016020 AmiGO InterPro QuickGO	Cellular component	Membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.	Subterm of GO:0005575

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2001930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Cicer arietinum] gi\|502157089\|ref\|XP_004510754.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.30.60 IPR006685 IPR010920 IPR011014 NON_CYTOPLASMIC_DOMAIN PF00924 PTHR30566 PTHR30566:SF5 SSF50182 SSF82861 TMhelix TRANSMEMBRANE mobidb-lite	14
Lj4g3v2001930.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Cicer arietinum] gi\|502157089\|ref\|XP_004510754.1\|	Domains CYTOPLASMIC_DOMAIN IPR006685 IPR011014 NON_CYTOPLASMIC_DOMAIN PF00924 PTHR30566 PTHR30566:SF5 SSF82861 TMhelix TRANSMEMBRANE mobidb-lite	11
LotjaGi3g1v0386200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mechanosensitive ion channel protein; TAIR: AT4G00290.1 Mechanosensitive ion channel protein; Swiss-Prot: sp\|Q8VZL4\|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial; TrEMBL-Plants: tr\|A0A0S3SYM0\|A0A0S3SYM0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0386200	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.30.60 IPR006685 IPR010920 IPR011014 IPR023408 NON_CYTOPLASMIC_DOMAIN PF00924 PTHR30566 PTHR30566:SF5 SSF50182 SSF82861 TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi3g1v0386200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mechanosensitive ion channel protein; TAIR: AT4G00290.1 Mechanosensitive ion channel protein; Swiss-Prot: sp\|Q8VZL4\|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial; TrEMBL-Plants: tr\|A0A0S3SYM0\|A0A0S3SYM0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0386200	Domains CYTOPLASMIC_DOMAIN IPR006685 IPR011014 NON_CYTOPLASMIC_DOMAIN PF00924 PTHR30566 PTHR30566:SF5 SSF82861 TMhelix TRANSMEMBRANE mobidb-lite	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00