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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2001930 |
| Transcript ID | Lj4g3v2001930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Cicer arietinum] gi|502157089|ref|XP_004510754.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 173 | 173 | – | – | |
| PANTHER | 67 | 522 | 456 | 2.50E-196 | – | |
| PANTHER | 67 | 522 | 456 | 2.50E-196 | – | |
| MobiDBLite | 100 | 130 | 31 | – | – | |
| TMHMM | 174 | 196 | 23 | – | – | |
| Phobius | 174 | 196 | 23 | – | – | |
| Phobius | 197 | 237 | 41 | – | – | |
| Phobius | 238 | 260 | 23 | – | – | |
| TMHMM | 258 | 280 | 23 | – | – | |
| Phobius | 261 | 265 | 5 | – | – | |
| Phobius | 266 | 284 | 19 | – | – | |
| SUPERFAMILY | 267 | 350 | 84 | 1.96E-08 | ||
| Phobius | 285 | 304 | 20 | – | – | |
| Phobius | 305 | 325 | 21 | – | – | |
| Pfam | 310 | 512 | 203 | 1.00E-34 | ||
| TMHMM | 314 | 336 | 23 | – | – | |
| Phobius | 326 | 330 | 5 | – | – | |
| Phobius | 331 | 350 | 20 | – | – | |
| Phobius | 351 | 523 | 173 | – | – | |
| SUPERFAMILY | 352 | 417 | 66 | 6.87E-14 | ||
| Gene3D | 368 | 416 | 49 | 1.40E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2001930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2001930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.