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TIGR00757

Source: TIGRFAM

Description

RNaseEG: ribonuclease, Rne/Rng family

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0004540
Molecular function Ribonuclease activity Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.
Subterm of
GO:0006396
Biological process RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Subterm of
Part of

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
Lj2g3v2220800.1
– Ribonuclease E [Medicago truncatula] gi|357490525|ref|XP_003615550.1|
Domains
7
LotjaGi1g1v0125400.1
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|I1MB77|I1MB77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
Domains
14
LotjaGi1g1v0125400.2
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2S438|A0A0B2S438_GLYSO Ribonuclease E; Found in the gene: LotjaGi1g1v0125400
Domains
14
LotjaGi1g1v0125400.3
– Ribonuclease E/G family protein; TAIR: AT2G04270.2 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|K7M7Z2|K7M7Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
Domains
6
LotjaGi1g1v0125400.4
– Ribonuclease E/G family protein; TAIR: AT2G04270.2 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|K7M7Z2|K7M7Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR00757 TIGRFAM 1 20.00