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PF00686

Source: Pfam

Description

Starch binding domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:2001070
Molecular function Starch binding Interacting selectively and non-covalently with starch.
Subterm of

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
Lj0g3v0021379.1
– Alpha-amylase [Medicago truncatula] gi|357468733|ref|XP_003604651.1|
Domains
13
Lj1g3v4081830.1
– PREDICTED: 4-alpha-glucanotransferase DPE2-like isoform X1 [Cicer arietinum] gi|502107608|ref|XP_004493318.1|
Domains
19
Lj5g3v2302970.1
– PREDICTED: phosphoglucan, water dikinase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502121720|ref|XP_004497422.1|
Domains
18
Lj5g3v2302970.2
– PREDICTED: phosphoglucan, water dikinase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502121720|ref|XP_004497422.1|
Domains
11
LotjaGi1g1v0125400.1
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|I1MB77|I1MB77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
Domains
14
LotjaGi1g1v0125400.2
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2S438|A0A0B2S438_GLYSO Ribonuclease E; Found in the gene: LotjaGi1g1v0125400
Domains
14
LotjaGi1g1v0439400.1
– Phosphoglucan, water dikinase, chloroplastic; TAIR: AT5G01260.1 Carbohydrate-binding-like fold; Swiss-Prot: sp|P04830|CDGT1_PAEMA Cyclomaltodextrin glucanotransferase; TrEMBL-Plants: tr|A0A0B2SVU5|A0A0B2SVU5_GLYSO Alpha-amylase; Found in the gene: LotjaGi1g1v0439400
Domains
11
LotjaGi1g1v0657200.1
– 4-alpha-glucanotransferase; TAIR: AT2G40840.1 disproportionating enzyme 2; Swiss-Prot: sp|Q8RXD9|DPE2_ARATH 4-alpha-glucanotransferase DPE2; TrEMBL-Plants: tr|G7L4U3|G7L4U3_MEDTR 4-alpha-glucanotransferase DPE2; Found in the gene: LotjaGi1g1v0657200
Domains
20
LotjaGi3g1v0210300.1
– Phosphoglucan, water dikinase, chloroplastic; TAIR: AT5G01260.2 Carbohydrate-binding-like fold; Swiss-Prot: sp|P31797|CDGT_GEOSE Cyclomaltodextrin glucanotransferase; TrEMBL-Plants: tr|G7JN22|G7JN22_MEDTR Starch-binding domain protein; Found in the gene: LotjaGi3g1v0210300
Domains
11
LotjaGi5g1v0365700.1
– Phosphoglucan, water dikinase; TAIR: AT5G26570.1 chloroplastidic phosphoglucan, water dikinase (ATGWD3); Swiss-Prot: sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic; TrEMBL-Plants: tr|A0A151U892|A0A151U892_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0365700
Domains
11
LotjaGi5g1v0365700.2
– Phosphoglucan, water dikinase; TAIR: AT5G26570.1 chloroplastidic phosphoglucan, water dikinase (ATGWD3); Swiss-Prot: sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic; TrEMBL-Plants: tr|A0A072UBU6|A0A072UBU6_MEDTR Phosphoglucan, water dikinase; Found in the gene: LotjaGi5g1v0365700
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 9.09