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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0125400 |
| Transcript ID | LotjaGi1g1v0125400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2S438|A0A0B2S438_GLYSO Ribonuclease E; Found in the gene: LotjaGi1g1v0125400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19792643..19802589) extracted from Lotus japonicus Gifu genome v1.2.
TTGCACTGCACCCCTTGCATTTCCCGCTTAATATAGCAAATTGTAATGTATTGTCATATTGATTGCTGGTTATCTTAACC TATTTACTTATAGGATGATGGAAGATAAAAAATACATAATTTATGCTTTTGTATTTGGAAGTTAAGATAATTATGGATAG ATCAATAATGATGATTAGTACCTAGGAGTGGTGATGATATATCATTATGTTGATGGAAATGTATTCTTTACAGTGTTAAT TGTCTTTGGTCTGAGTTGGACTTATGTATTATAATATTGTTATAGGCACATATGTCATCATGTACAACTGCACAGTGTAT TCAGACTCACATGCTGCATGAAAAACCATAAATCAGTTAGAAGATTAGCTGCATTGTCAACAGAGAGAGGTAACTTAAGC ATCTTTTCGTGATCTCTTATTAATTTATTTTCTTATTACTTGATTTTTATATATATGGTTGTCTCCTTAGTCCTTTCTTT AGGCTACATATTTCTTGCTTTAATTTATTTTGTTCGATCCTTATCCCAAGTCCCAACTGTATTGTTCAAGAATTAACATC TAAATCATGTCATTTTATTTAAATTATACAGCTTAAATTGTACTGGTAGAATCTGATTCAATTTTGGCTTTACAGAAGAA CACAGGGTCAGGACTCAACCACTCAGGAGTTAGATCATGTACTTCTTGTTAAAATAATTGATTCTTGTAGTGATATAATT ACCTTTGTTGTACAGCTGAAAAGTAAATAATTAGCCTGATGGATTAACAAGTTCATAGGTCATATTTAATATGTTACTGT AAACACGTTCATAAGCTGCAATGCAGCATGCCACTTAAAATTTTCAATTATTGTTAAATGATTGGAGCTAACTTTATGAC TAGGGGTCAGTTTTTATTTTTAATTAAATGAAGTTAAAAGTATCTGAAGTTAACTTTATTGGAGAACTAAAGGCTGCAAC TACAACCATAGCAGCCATTTTCTTGGTGTTAGCTACATTAATCCTGAGTTTCTTTTTTCTTTTTAAATTCTTGGAGTTGT GTTCATGTTTCTCTTAATTTTTTATGAGGTAAGGATACTTTTTAAATTTGCTACTTCGCTAGCTATCAAATATGGTCTCT CTCAGTAATATACTAGTATGCATTTTGTGTGGGTGTGAAATCTTCCTTTTGGTATTAATGTTCAATATCATGCTTTCTCA ATGTACTTCCCTCCAGTTTAGAATGAATTTTGAATCTGGGAGGTCTGATTTCTCAGGCAAGCCAACCACTAGTGTTGATG AGCTATGCAAGATTATTTGGACTGTAGAAGCGGATTTGGAAGATGGTCACCTTCTGTACATAACTGGTGATCCTGCTGAA TTAGGCTGCTGGAAACCAAACATGGCTATGCTAATGTCTCCTACGGAGCACACTAATATATGGAAAGCTGAATTTCAGGT AATTTTACCTGGCTGTCAAATTTAATCATATATTTATTCAGTTGTATGGAAAGAAAAGCTGAAAAAAGTTTAGATGAGAA GATGTTTCTACATTCAAATTAACTTCTCGTATTTATATTGCCTGGAGCTGAGTTCAGCTGAATATGTTTTTTTTATACAA AGAAAGAAACATATAAAGAAAACCAACACAATATATTGGAAATAGTAGATAGGATCCTTCCCCATTAGAGAAGGATCATA TCTCTAAAGCTTGCCCTTATTACTGGAAATCCTCAACAGAAATACCCTTTAAAAGCAAATACTTTCCTGTCCATTGGAGT TGCTGTTGGTACCTGTCAGTACAATGTAGTCTGTATTCTGTAATAAATGTGATAAGAACCTTGGGAGAACCATACCACAA AAGCTAGCCGTTGTAGTTGGATATTTTGCTCAAACTAGAATCCCATCCCATACTTCCAATGTGGGACTCAAGTCCCCATA CCTTTTGCAACACCCCTGCCACTCGTTTCTTTTGCGGCTGAGAGGCATGATACCAATTGATAAGAACCATGAGAGAACCA TACCACAAAAGCTAGCCGTTGTAGTTGGAGGGCTCAATGCCTTATAAACCCCACACTAGAATCCCATACTTCCAATGTGG GACTGAAGTCCCTTACCTTCAAACTGGATCCTAACAAAAGATATGTGACTGGTTGCAGCAATTTTGGTTCCTCCTGATCA AAATATTCCTTCCATTATGAAGCTTCTTAATCTTGGAATACTGTATGAACATCAAAATACACAATTTTTTTATTGACTGC AGTGACTCAGTTTTAATATGATACTTGCAGGTTGCTTTTGGATTGAACTTCAAATATAATTATTTCATTAAGGGCAAACC AAGGTCTTCGAGTGACATTCTGTGGAAGCCTGGACCAGCATTTTCTCTGTCAGTACCTCTAACAATCCTTGATGACAATA AAATTGTGGTGAGGGACTTATGGATTAGGTCTGATTCCCAAATGTTTTCTGCTCATTTGTGGAGCTCTTGCTCAGAGGAA ATGTATCTTCTTGAGCAACCTTCTATATCTTTCCTTATCAAAGGTATTTCCTTCATCTTTTACACTATAGAAATACTTTC TTTTCCTAATATGTTTCTGAACACTCAAACAGTGGTTTGACAGATGAAGGAAGTAATAAAAGTATCCTTGAAAATGATGT CCTAAAGTCCGAGACAATACGTTTGGAAGATCTATTATTTCATGACAATGAGGACATGATGATTGCGAATGATAAGGATT CACATTCTACTACTATTCTTTCTGAGAATTACCAGCCTCTTGAAGAACCCTGGCTACTCCAGTCAACCCCTTCCGTTATC TCTGAGGATAAAATGGAATCCATTGAATCTGAATCTGAATCTGATGATACTGCAAAAGAGCAGGTGAAGCTAGTAGATAC AGAAAAGTTGTTACCTGAAGAAAGTAGTAATATAATTTCAAAAGACCCTGTTTCCACCATTATACTCATCAACTCATCAA TATGTACCATGCAAAGAATTGCGGTACTGGAGGATGAAAATTTGGTTGAGTTATTATTGGAACCCGTCAAGAGTAATGTG CAATGTGATAGTGTATATGTTGGGGTAATCACAAAGCTTGTTCCCCATATGGGCGGGGCTTTTGTTAATATTGGGAATTC TAGACCTGCTCTTATGGACATTAAACAATACAAGGGGCCATTCATATTCCCTCCATTTCATCAAAGGACAAAGAAACATG AAGTTGATCTAAAGGGTAAAAATGACCACATCTATAGTGCTACCGATATATCTGATGGAACATCAGACATACATTCTGAG GATGGTTGTTTAAATGCTGTACATAATGACTATGATGAGCATGAAGGAGATGAAGATTCATATATTTCAGAAGTTCTTGA GGAAAATGTAAATGGTAGCATGGTAGATGATGAAGTAGAAGCTGACTTTGAGGATGATATAGAGGGAAATGATGTGCATA TGGAAGTAGAAATGAATAACAGTTCTCTTTCTTTTGGCATGAATGGCTCTGTCAACTCTCATACTTTGCAAACAAAAAAT ACAGAGAGAGTAACCCGCGTGGCTTCGGGAGAAAACAAATGGACCCAAGTTCGCAAGGGAACCAAAATAATTGTCCAGGT TGTCAAAGAGGGCCTTGGTACCAAGGGTCCCACTTTGACTGCTTATCCTAAACTAAGAAGTAGATTCTGGGTATGTGTTT TTTTATGTTAGCTTCTTGTGTAAGGTTTTATTGTGTATCACTGTTGGTCTTTCTCATAAATTATCTAAACTGTATTTCAT CTGAGTTAGACTCTCTGACTTGTAGGTTTTGATTGCACGTTGTGATAAAATTGGAGTCTCCAAAAAGATTTCTGGTGTTG AGCGCACAAGGCTGAAAGTTATCGCAAAGCGATTGCAGCCTGAGGGTTTTGGCCTCACTGTAAGAACTGTTGCTGCCGGT CATTCTTTTGAAGAACTGCAGAAAGACTTAGAAGGTTTGCTTTCGACTTGGAAAAATATAATGGAACATGCAAAATCTGC AGCTCTTGCTGCTGATGAAGGGGTGGAAGGAGCTGTTCCAGTTATTTTGCACAGGGCAATGGGTCAAACTCTCTCAGTGG TCCAGGATTATTTCAATGAAAATGTTAGTTCTGTTACTAATTTTAAGTGATTCTGTTGATCTTTTAACTTGTGCTGTCTA TTTATACTAAAAAGAAAATCTACACTTTTTTTTGTCCTCTCCTGATTACAATTTACCATGGTGTACTCCAGGTTAAGAAA ATGGTAGTTGACTCCCCAAGGACATTTTACGAGGTACGATATCAGCTAATTGCAGAAGTTTTATTATTACAACTGCAGCA TATTTATTTTTGCATGTGAACAGTATTGGTTTTCTTCCCCCAATACAGAGACAACCAAGAATAGTAGGGTAATTATTCAC TGTGGGAATTAGTTTGTGAACCCATCTGTAGGATGGCTTGGCAGCTGTTGATTTACCATTTTCTGTTAGCAGTGCCATTC AAAAGCCTGGAAAAAGTGAAGAATTGTGGCGTGCATCGTACATGTTTACAAGACTTAAATTTCTTTAATCTATGTCCTAT GTTAGCATGCTGATTGTCTGATCCAGTTATTTGTAGGAAAATATTACTATATGAATGGAATAATTATTTTTTGCGATTGC AAAACATATACCAACACTAATTTAAGATTCAACATAGAAACTTCTGTTTGGTGATTTCAATTTTTTTATTTGATTTCCAG GTAACAAATTATCTACAGGAAATAGCACCTGATCTTTGTGATCGAGTTGAACTATATGATAAAAAAGTTCCCCTTTTTGA TGAATTCAAAATTGAAGGAGAACTTGACAATATCCTCAGCAAAAGGTAAATTTTTGTTGCTTCTTTTGTTGATAACCATC CATGCTTATATAGTTATATTGTACATTGTCCCTTGTCCTTATAATCGTCTTTAAAAAAATGCATGAAATGGTGTTAGAAT ATCCTCAAACTATTTTAGATAGTATCTTTAACGTATCTAATTTTAGAATATCTTAAAAGATCTTCACCAGCTTGAGTGGG AGTGCGGAAATCTGTGATAATTTTAGGAAAAAAGTATTATATTTATTGGAAAGTTGTATAATGAATTATTTCCTGTACAA ATTGTGCGATTAATCCATTAAATCAAGTAATCTTTGATTTTCCTTTTTGCCTAAAATAGTAAAGGCCTTATGTATATATT CTGTATGATTATTTTTCAGATTAGTGCAATGAAAATGAATTCATTCAATCCTAAATTCTGTGAGGACAAAAAATCACCTT GTAATTATAAAAGGCATTCTTAAATTAGAAAGCGGACAGACACTTATATCTTCATGATATCAAAATATTGATTTTTCTCA AGTCAACCATTCAATGTTATGAAAAATCATAATATTATTAAATTAATTGAAGAAAAAAAGGCTAAACGGTAAATAGCAGT CTGTTTGTCTATATTCTTATGTAGTTTCAACTGATCTGGCCTTCCTGGAAACTTTATAATAAAAATTCTTAATGTGCAAG ATTTCTTTTTGTTGATCACTTTATAGGGTTCCACTTGCTAATGGAGGTTCTCTAATCATCGAACAAACTGAGGCATTAGT TTCTATTGATGTGAATGGAGGACATGGGATGCTAGGTCATGGAACTTCACAGCAGAAAGCTATTCTAGAAGTCAATCTTA CAGCTGCAAAACAGGTAGGTCGAGGCCACACTCTATTACCATTTATCTGCACATGACATAGGCTTTAGCAAGACAAATTT TGTATTTTCTGATGTGTGCAGACAATTACTGTTATTCCTTTTCATGAAAATCTGTTTACTCTTCACTACTTTCTTTTTTT TATCTTATGATAATATATATATAGTGAGCATCCATTAATATGGAGTGCAGAGATATTTCTGCAATGTCAATGAATTCTTT TCCGTAAGAATTTCAGGGACATTTCAAGAAATTAAATATTTAATTTGGAGTTAAAATCTGGTCTATTATCAGCATAAACT TTATACGTTATCAAGTGAAAAGAAATGTCGTGTCAAGATAAGACATTTTACTTTCAGCGGTACTCTTAAGTGATATGTGG TGGCATAGAGTTCTGTCTAACTATTTTTATACTGTCACAGGATATAATTTAAATCCTTTGCTGAATTACTCAGTTGGTTT AGAGTGAGTAGTGATTAGCGATTCTCTGTTTAGATTAAGTAGTTATCCATGTTCCCAGCGTGAATGCGTCACAGTTAGAC AAATAGTGTTCTAGTAGCAGTTTACTGAAATTAAATACAAAAATATGTGATATTGTCCATGCTTCAAGCCTAGAGGGTCT TGCATGAGGGGAGATGCTAAATATCAGCCATTTATAAGCCTTCAGTTAACAATTTATGCTTTGTGAGAGTTGGTCTTGGC GCTCTGCATTCAGGATCTTACTTAATTTGCTTCTGGTCTTAGAAGTTAACTTTATCTCTGTAAATTTCATATTGATTAAG TACATTAGTTAGTAGCCTATTATTTTCAAAAGGGAAGGGTAAATAAGGAGCTATATGCAACCGGTAATTTAAATATTGCC CTTTTCTATTTTAATTCGTTAACCCACCTCCTAAGTAAAATGACAAGAGAAGTGCCAAGAGTAAATAAGAGGGCAAGAAA GAATACCAATACTTGCCACATGGCATACACAAATTAGAGATTTCTTATTTACTCTGTCAATCTTGTAAAGAAACATTTGA TGATTGATTAAGAAAGAATACCAATATTTGCCACATTGATGATTGATTATATTTCATTTTTATGTTTTCTTAAGCTAAAG TGTTGATTATCATGGAGTTATATTTCAATTGTATATTGTTTGTTTTGTCTTGCAACATTAATTCATAAAGTGTTACAGAT TGCAAGGGAGTTGCGAGTACGGGATATTGGTGGCATCATTGTGGTAGATTTCATTGATATGACAGACGAAGGTAAATAGA AATCTCCCACTTGTTTGTGCAAATGAAGTTTATATTAAGTACTATGGGAAGAAGGTCTCTCTTGGATGTAGTTTTAGAAT ATTTTAATATCACTGGTTGGAGTTTTAGAATCACTGGCTTATGCTTTACATAATACTATGTCATAGTTTCATGGACTGGG AGCTCTGACTAAGCCATCTAGCCTCTGAAATGACATATTCCTTCCAAACAATCTTCTATATGTTGTACATTTAAGTTTAT GCAATGGTATTTAGCTTACGGATGAAATAGCTAATTTTTGTGCCACTCTGCAATGACATATCCCTTGGTGTTAGTCACCA ATATATTTGATTATTGAATTTGGATTCTTCTTAATCAGTAAATAAAAGATTGGTCTATGAAGAAGTCAAGAAAGCCTTTG AAAGGGACAGATCAATGGTGAAGGTCTCTGAACTATCAAGACATGGACTCATGGAAATAACAAGAAAGAGGGTAAAGGCA GATATGCCACTTTTACTTCTTTTTCTTTTATTTTACTGATCGTCATCCTTCATACTTCTTCAATTCACACACGAAGGAAT GTAGATTTATGAAAAGCATAATGCATGAAATACAACTTAAGTTGCATTCTCCTCTAATGATTTTTGGCACACCACCCAGT TAAGTTTAGTAGGATTAAATAAGTTATAAATGTTTTACCAATGTTTGACAGGTTCGACCAAGTGTGACATTCATGATTAG TGAGCCATGTGCTTGTTGCCATGCCACGGGCAGGGTTGAAGCTTTAGAGACGTCCTTCTCAAAAATTGAACAGCAAATCT GTCGGTTTCTCGTAAGTAGACATTTTCAATCACAGAATTTGGTAGTATCAATAAGATCATGGAAAAAACAAGGGTTCAAG TCAAGAAAGGGAGCCTTGGCGCAACGGTAAAAAAGTTGCTGTCATGTGTCTTGGTCACAGGTTCAAGTCCTAGAAATAGC CTCTTGTGTAAAGAAAACAAGGTAAGGCTGCGTACAATAGACCAAATGGTCAGACCCCTTCCCAGACCCGCGCATGCGGG AGCTTCGTGCACTGGGCTTCCCTTTTAATAAGATCAAGGGAAAAAAAAGACTAAAAGCCGAAGAGTCGAAGGCATGAAAA GCTCTATTTGACATTTCCTTAAAGGCTTAGAGTCAATAATGTTTCATCTATTTTGTAAGATTAACGTTAGGGTCTCTTCA TTGGCCTTCCTTTGTGCATCTTACAAGCTGCAAGATGTTTTATTCTTCCTTTTATTCTTAGTTACTGCCAACTTATTTCT CTTAGTTCTGCTCACTTCCCCTAGCATTGTTAGGTTGTTACTCATTGTAGTGAATGTGATTTTTTGTATTTCTTCTCATT CATATCCCAGGCAACCATGGACTGTAAGGCTGACCCTGGAAACCCCAAGTCTTGGCCAAAATTTATTCTGAGGGTTGATC ATCATATGTGCGAGTACTTGACTTCAGGGAGAAAGACAAGACTTGCAATATTGAGCAGTTCTCTCAAAGTCTGGATTCTC TTAAAGGTATAACTGATCAATGGATACTTTGCTTAAATGATTGTCACTATGCTTATGCTGTTATACAGCTGTCATTAAAA CAGCTTAATTAAGCGCTTATTATAATACACGCTTATCGTATAAATGTTTATTCGTAAGCTAATTTGAGAAACTTATTGAA ATAAGCTTGAAGTAGGTTAGATAAGCATAAGCTCTTATTCATAAGCTAATTTGAGCAGCTTATGAAAATAAACTCAGAAC AACTTGTAGGTAAGTCATAAGCTATTTACATAAGTTCTCCCAAACACTTGCATAAGCGCTTATGCTATAAGATAAGCTCA AATAAGCTCTTCCAAACAGGGTCTAATTTATCAGTTCAGTTTACTTTAATCTCATAAAATACCTGTTATTGCTCAAGGAG TGCTGTATGGAGGAAAAGCCCCCACGGCAAGGCCGGCCCAACACCAAATGAGGCCTAAAGCGTATTTTAATTTTGGGGGC CTTGAAACATGTTTGATCTAATATAAAATTTTGTTAATTTTAATTTTGGGGGCCTTTTTTACTTAAGAAAAAACAAAAAA AATTGGAGGCCTAAAGCCCTTGCTTGGGTGGCTTTACCCTTGGGCCGGCCCTGCCCCACGGCCATCATATATAATAATTA TAAAGTAATGGCATGTGTCTTAATTACTTCTTTTTCCATATTTATCATAAATGATTCCATTGATTGAATACTGTGATTGT GGCATTACTTAAGCCACTTTCTCTAGGGATTACCGAAAGAGGGGGAAAACACTATTTGTGCATGTATGGGTGATTGCTGC ATAGTATATTCTTGTAATAGAATATGTTTGGTAGGAGTTAGCTAGCTTTGGAATAATAACTTATGAAATAACGAGTTTAG GAAACAAGAATTTCACTTAAAAAGTAATTTTGGGTATAATTAGCAAGAGATGCCAAGATTACCTTTGTTTGGAAGTAACT AGAGTTGATTTTCAACTTCACTAGACACTACACTGTATTTAATGGGGTTCTTCTACAGAGTGAATTCTATGTTAGGAATG CTTCCTAGATTTTATCTTTCATGAGCTATCAAGACACGCCAGAACAGTTGAGCTCTTTAGAAAAGCTAGACTGGATCTTT ATTTACCAGTTTTATTCATATAAGAATTTTGGTGGCAAAGCTTCTATGATTTTGGATTGATAAAGGCATTACTATGGAAG TGATTGATGTTTCAGTTATTTCTCAGAGGGTCATGGTTGTCAAGTCCTGCATTACTGCGCACTGATTAGCTGTTTTGAAT CCTTCAGGTTGCTAGAGGGTTCACTAGAGGAGCATTCGAGGTCAAACCATTTGCAGATGACAAAGTGGGGAAAAACCAGA ATCAGGTTGCTCTTTCAATTTTAAGATCCTCAGAGGCCAGAACCAAGAAGCCTGGCCAAAACCTGACTCTTGTTCAAGTA AAAAAATCAAAGGCTAGGGGAAAGTAA
CDS sequence (LotjaGi1g1v0125400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAACCATAAATCAGTTAGAAGATTAGCTGCATTGTCAACAGAGAGAGGCAAGCCAACCACTAGTGTTGATGAGCT ATGCAAGATTATTTGGACTGTAGAAGCGGATTTGGAAGATGGTCACCTTCTGTACATAACTGGTGATCCTGCTGAATTAG GCTGCTGGAAACCAAACATGGCTATGCTAATGTCTCCTACGGAGCACACTAATATATGGAAAGCTGAATTTCAGGTTGCT TTTGGATTGAACTTCAAATATAATTATTTCATTAAGGGCAAACCAAGGTCTTCGAGTGACATTCTGTGGAAGCCTGGACC AGCATTTTCTCTGTCAGTACCTCTAACAATCCTTGATGACAATAAAATTGTGGTGAGGGACTTATGGATTAGGTCTGATT CCCAAATGTTTTCTGCTCATTTGTGGAGCTCTTGCTCAGAGGAAATGTATCTTCTTGAGCAACCTTCTATATCTTTCCTT ATCAAAGATGAAGGAAGTAATAAAAGTATCCTTGAAAATGATGTCCTAAAGTCCGAGACAATACGTTTGGAAGATCTATT ATTTCATGACAATGAGGACATGATGATTGCGAATGATAAGGATTCACATTCTACTACTATTCTTTCTGAGAATTACCAGC CTCTTGAAGAACCCTGGCTACTCCAGTCAACCCCTTCCGTTATCTCTGAGGATAAAATGGAATCCATTGAATCTGAATCT GAATCTGATGATACTGCAAAAGAGCAGGTGAAGCTAGTAGATACAGAAAAGTTGTTACCTGAAGAAAGTAGTAATATAAT TTCAAAAGACCCTGTTTCCACCATTATACTCATCAACTCATCAATATGTACCATGCAAAGAATTGCGGTACTGGAGGATG AAAATTTGGTTGAGTTATTATTGGAACCCGTCAAGAGTAATGTGCAATGTGATAGTGTATATGTTGGGGTAATCACAAAG CTTGTTCCCCATATGGGCGGGGCTTTTGTTAATATTGGGAATTCTAGACCTGCTCTTATGGACATTAAACAATACAAGGG GCCATTCATATTCCCTCCATTTCATCAAAGGACAAAGAAACATGAAGTTGATCTAAAGGGTAAAAATGACCACATCTATA GTGCTACCGATATATCTGATGGAACATCAGACATACATTCTGAGGATGGTTGTTTAAATGCTGTACATAATGACTATGAT GAGCATGAAGGAGATGAAGATTCATATATTTCAGAAGTTCTTGAGGAAAATGTAAATGGTAGCATGGTAGATGATGAAGT AGAAGCTGACTTTGAGGATGATATAGAGGGAAATGATGTGCATATGGAAGTAGAAATGAATAACAGTTCTCTTTCTTTTG GCATGAATGGCTCTGTCAACTCTCATACTTTGCAAACAAAAAATACAGAGAGAGTAACCCGCGTGGCTTCGGGAGAAAAC AAATGGACCCAAGTTCGCAAGGGAACCAAAATAATTGTCCAGGTTGTCAAAGAGGGCCTTGGTACCAAGGGTCCCACTTT GACTGCTTATCCTAAACTAAGAAGTAGATTCTGGGTTTTGATTGCACGTTGTGATAAAATTGGAGTCTCCAAAAAGATTT CTGGTGTTGAGCGCACAAGGCTGAAAGTTATCGCAAAGCGATTGCAGCCTGAGGGTTTTGGCCTCACTGTAAGAACTGTT GCTGCCGGTCATTCTTTTGAAGAACTGCAGAAAGACTTAGAAGGTTTGCTTTCGACTTGGAAAAATATAATGGAACATGC AAAATCTGCAGCTCTTGCTGCTGATGAAGGGGTGGAAGGAGCTGTTCCAGTTATTTTGCACAGGGCAATGGGTCAAACTC TCTCAGTGGTCCAGGATTATTTCAATGAAAATGTTAAGAAAATGGTAGTTGACTCCCCAAGGACATTTTACGAGGTAACA AATTATCTACAGGAAATAGCACCTGATCTTTGTGATCGAGTTGAACTATATGATAAAAAAGTTCCCCTTTTTGATGAATT CAAAATTGAAGGAGAACTTGACAATATCCTCAGCAAAAGGGTTCCACTTGCTAATGGAGGTTCTCTAATCATCGAACAAA CTGAGGCATTAGTTTCTATTGATGTGAATGGAGGACATGGGATGCTAGGTCATGGAACTTCACAGCAGAAAGCTATTCTA GAAGTCAATCTTACAGCTGCAAAACAGATTGCAAGGGAGTTGCGAGTACGGGATATTGGTGGCATCATTGTGGTAGATTT CATTGATATGACAGACGAAGTAAATAAAAGATTGGTCTATGAAGAAGTCAAGAAAGCCTTTGAAAGGGACAGATCAATGG TGAAGGTCTCTGAACTATCAAGACATGGACTCATGGAAATAACAAGAAAGAGGGTTCGACCAAGTGTGACATTCATGATT AGTGAGCCATGTGCTTGTTGCCATGCCACGGGCAGGGTTGAAGCTTTAGAGACGTCCTTCTCAAAAATTGAACAGCAAAT CTGTCGGTTTCTCGCAACCATGGACTGTAAGGCTGACCCTGGAAACCCCAAGTCTTGGCCAAAATTTATTCTGAGGGTTG ATCATCATATGTGCGAGTACTTGACTTCAGGGAGAAAGACAAGACTTGCAATATTGAGCAGTTCTCTCAAAGTCTGGATT CTCTTAAAGGTTGCTAGAGGGTTCACTAGAGGAGCATTCGAGGTCAAACCATTTGCAGATGACAAAGTGGGGAAAAACCA GAATCAGGTTGCTCTTTCAATTTTAAGATCCTCAGAGGCCAGAACCAAGAAGCCTGGCCAAAACCTGACTCTTGTTCAAG TAAAAAAATCAAAGGCTAGGGGAAAGTAA
Protein sequence (LotjaGi1g1v0125400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNHKSVRRLAALSTERGKPTTSVDELCKIIWTVEADLEDGHLLYITGDPAELGCWKPNMAMLMSPTEHTNIWKAEFQVA FGLNFKYNYFIKGKPRSSSDILWKPGPAFSLSVPLTILDDNKIVVRDLWIRSDSQMFSAHLWSSCSEEMYLLEQPSISFL IKDEGSNKSILENDVLKSETIRLEDLLFHDNEDMMIANDKDSHSTTILSENYQPLEEPWLLQSTPSVISEDKMESIESES ESDDTAKEQVKLVDTEKLLPEESSNIISKDPVSTIILINSSICTMQRIAVLEDENLVELLLEPVKSNVQCDSVYVGVITK LVPHMGGAFVNIGNSRPALMDIKQYKGPFIFPPFHQRTKKHEVDLKGKNDHIYSATDISDGTSDIHSEDGCLNAVHNDYD EHEGDEDSYISEVLEENVNGSMVDDEVEADFEDDIEGNDVHMEVEMNNSSLSFGMNGSVNSHTLQTKNTERVTRVASGEN KWTQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLIARCDKIGVSKKISGVERTRLKVIAKRLQPEGFGLTVRTV AAGHSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNENVKKMVVDSPRTFYEVT NYLQEIAPDLCDRVELYDKKVPLFDEFKIEGELDNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGTSQQKAIL EVNLTAAKQIARELRVRDIGGIIVVDFIDMTDEVNKRLVYEEVKKAFERDRSMVKVSELSRHGLMEITRKRVRPSVTFMI SEPCACCHATGRVEALETSFSKIEQQICRFLATMDCKADPGNPKSWPKFILRVDHHMCEYLTSGRKTRLAILSSSLKVWI LLKVARGFTRGAFEVKPFADDKVGKNQNQVALSILRSSEARTKKPGQNLTLVQVKKSKARGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 19 | 130 | 112 | 4.2E-11 | ||
| ProSiteProfiles | 22 | 131 | 110 | 15.326 | ||
| SMART | 27 | 120 | 94 | 0.0018 | ||
| SUPERFAMILY | 27 | 129 | 103 | 2.7E-16 | ||
| Pfam | 32 | 115 | 84 | 5.7E-11 | ||
| PANTHER | 107 | 942 | 836 | 1.9E-250 | – | |
| PANTHER | 107 | 942 | 836 | 1.9E-250 | – | |
| TIGRFAM | 286 | 824 | 539 | 2.1E-105 | ||
| Pfam | 513 | 792 | 280 | 1.8E-84 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Ribonuclease activity | Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. | ||
| Molecular function | Starch binding | Interacting selectively and non-covalently with starch. |
Expression pattern of LotjaGi1g1v0125400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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