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GO:0004540

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description Ribonuclease activity
Full defintion Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.
Subterm of

Relationships

The relationship of GO:0004540 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
ISBN
Oxford Dictionary of Biochemistry and Molecular BiologyOxford Dictionary of Biochemistry and Molecular Biology

Anthony David Smith · ISBN: 0198547684

Oxford University Press, USA, 1997 · 762 pages

Arranged in A-to-Z order, the more than 17,000 entries provide basic information about fundamental, physiochemical laws, chemical compounds, constants, and formulae. The Dictionary also describes the essential features of some 2,000 enzymes and proteins, the reactions they catalyze and the functions they perform. These entries also include filenames to facilitate the location of entries in databases of sequences and definitions of 950 abbreviations and symbols. Designed for students, teachers, researchers and other professionals in any area of the biomedical sciences, the Dictionary has been fully updated anf revised to incorporate new information discovered since the original edition was published in 1997.

Associated Lotus transcripts 29

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj1g3v3717070.1
– POP4-like protein [Arabidopsis thaliana] gi|334184895|ref|NP_001189739.1|
GO terms
4
Lj1g3v3717080.1
–
GO terms
4
Lj1g3v3717090.1
– Ribonuclease P protein subunit p29 [Medicago truncatula] gi|357481161|ref|XP_003610866.1|
GO terms
4
Lj1g3v4302170.1
– Ribonuclease P protein subunit p29 [Medicago truncatula] gi|357481161|ref|XP_003610866.1|
GO terms
4
Lj2g3v1589600.1
– PREDICTED: serine/threonine-protein kinase ppk4-like [Cicer arietinum] gi|502161785|ref|XP_004512283.1|
GO terms
2
Lj2g3v1599840.1
– PREDICTED: serine/threonine-protein kinase ppk4-like [Cicer arietinum] gi|502153776|ref|XP_004509458.1|
GO terms
2
Lj2g3v2124840.1
– Ribonuclease P protein subunit p29 [Medicago truncatula] gi|357481161|ref|XP_003610866.1|
GO terms
4
Lj2g3v2124840.2
– Ribonuclease P protein subunit p29 [Medicago truncatula] gi|357481161|ref|XP_003610866.1|
GO terms
4
Lj2g3v2184480.1
– PREDICTED: probable ribonuclease P/MRP protein subunit POP5-like [Glycine max] gi|356500813|ref|XP_003519225.1|
GO terms
2
Lj2g3v2220800.1
– Ribonuclease E [Medicago truncatula] gi|357490525|ref|XP_003615550.1|
GO terms
3
LotjaGi1g1v0125400.1
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|I1MB77|I1MB77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
GO terms
3
LotjaGi1g1v0125400.2
– Ribonuclease E/G family protein; TAIR: AT2G04270.1 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|A0A0B2S438|A0A0B2S438_GLYSO Ribonuclease E; Found in the gene: LotjaGi1g1v0125400
GO terms
3
LotjaGi1g1v0125400.3
– Ribonuclease E/G family protein; TAIR: AT2G04270.2 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|K7M7Z2|K7M7Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
GO terms
3
LotjaGi1g1v0125400.4
– Ribonuclease E/G family protein; TAIR: AT2G04270.2 RNAse E/G-like protein; Swiss-Prot: sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic; TrEMBL-Plants: tr|K7M7Z2|K7M7Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0125400
GO terms
3
LotjaGi1g1v0127900.1
– Ribonuclease P/MRP protein subunit POP5, putative; TAIR: AT1G04635.1 ribonuclease P family protein / Rpp14 family protein; Swiss-Prot: sp|Q6AWV1|POP5_ARATH Probable ribonuclease P/MRP protein subunit POP5; TrEMBL-Plants: tr|C6T5D2|C6T5D2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0127900
GO terms
2
LotjaGi1g1v0154400.1
– DIS3-like exonuclease 2; TAIR: AT1G77680.1 Ribonuclease II/R family protein; Swiss-Prot: sp|P0DM58|DI3L2_ARATH DIS3-like exonuclease 2; TrEMBL-Plants: tr|A0A0R0GK53|A0A0R0GK53_SOYBN DIS3-like exonuclease 2; Found in the gene: LotjaGi1g1v0154400
GO terms
2
LotjaGi2g1v0353800.1
– Kinase, putative; TAIR: AT2G17520.1 Endoribonuclease/protein kinase IRE1-like protein; Swiss-Prot: sp|Q9C5S2|IRE1A_ARATH Serine/threonine-protein kinase/endoribonuclease IRE1a; TrEMBL-Plants: tr|G7K1A9|G7K1A9_MEDTR Endoribonuclease/kinase IRE1-like protein; Found in the gene: LotjaGi2g1v0353800
GO terms
2
LotjaGi2g1v0448500.1
– Ribonuclease P protein subunit p29; TAIR: AT2G43190.1 ribonuclease P family protein; Swiss-Prot: sp|Q9CR08|RPP29_MOUSE Ribonuclease P protein subunit p29; TrEMBL-Plants: tr|I1LG21|I1LG21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448500
GO terms
5
LotjaGi2g1v0448500.2
– Ribonuclease P protein subunit p29; TAIR: AT2G43190.1 ribonuclease P family protein; Swiss-Prot: sp|Q9CR08|RPP29_MOUSE Ribonuclease P protein subunit p29; TrEMBL-Plants: tr|I1LG21|I1LG21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448500
GO terms
5
LotjaGi3g1v0225700.1
– DIS3-like exonuclease 2; TAIR: AT5G02250.1 Ribonuclease II/R family protein; Swiss-Prot: sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MSB1|K7MSB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225700
GO terms
2
LotjaGi3g1v0225700.2
– DIS3-like exonuclease 2; TAIR: AT5G02250.1 Ribonuclease II/R family protein; Swiss-Prot: sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MSB1|K7MSB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225700
GO terms
2
LotjaGi4g1v0134700.1
– Kinase, putative; TAIR: AT2G17520.1 Endoribonuclease/protein kinase IRE1-like protein; Swiss-Prot: sp|Q9C5S2|IRE1A_ARATH Serine/threonine-protein kinase/endoribonuclease IRE1a; TrEMBL-Plants: tr|K7LEW9|K7LEW9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0134700
GO terms
2
LotjaGi4g1v0138200.1
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi4g1v0138200.2
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi4g1v0138200.3
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi4g1v0138200.4
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi4g1v0138200.5
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi4g1v0138200.6
– DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|V7AVD4|V7AVD4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0138200
GO terms
2
LotjaGi5g1v0083000_LC.1
– Kinase, putative; TAIR: AT2G17520.1 Endoribonuclease/protein kinase IRE1-like protein; Swiss-Prot: sp|Q7XIT1|IRE1_ORYSJ Serine/threonine-protein kinase/endoribonuclease IRE1; TrEMBL-Plants: tr|A0A0D9WYP0|A0A0D9WYP0_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi5g1v0083000_LC
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006397
Biological process MRNA processing 1 3.45