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TIGR01181

Source: TIGRFAM

Description

dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008460
Molecular function DTDP-glucose 4,6-dehydratase activity Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H(2)O.
Subterm of
GO:0009225
Biological process Nucleotide-sugar metabolic process The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
Subterm of

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
Lj0g3v0024229.3
– PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356556634|ref|XP_003546628.1|
Domains
13
LotjaGi3g1v0039300.1
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.2
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.3
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.4
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd05254 CDD 1 20.00