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IPR029903

Source: InterPro

Description

IPR029903 is a RmlD-like substrate binding domain.

<p>L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes. RmlD catalyses the final step of the dTDP-L-rhamnose synthesis. This entry represents the RmlD substrate binding domain, which is responsible for binding a sugar nucleotide [[cite:PUB00009948], [cite:PUB00009949]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0024229.1
– PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356525600|ref|XP_003531412.1|
Domains
11
Lj0g3v0024229.2
– PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356525600|ref|XP_003531412.1|
Domains
11
Lj0g3v0024229.3
– PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356556634|ref|XP_003546628.1|
Domains
13
Lj0g3v0131469.2
– Methionine adenosyltransferase 2 subunit beta [Medicago truncatula] gi|357514671|ref|XP_003627624.1|
Domains
8
Lj2g3v2003110.1
– PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera] gi|225426743|ref|XP_002282339.1|
Domains
8
Lj4g3v1327750.1
– PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cicer arietinum] gi|502176054|ref|XP_004515790.1|
Domains
8
LotjaGi2g1v0430400.1
– 3,5-epimerase/4-reductase; TAIR: AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase; Swiss-Prot: sp|Q9LQ04|RMLCD_ARATH Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase; TrEMBL-Plants: tr|F6HUI7|F6HUI7_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0430400
Domains
8
LotjaGi3g1v0039200.1
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039200
Domains
13
LotjaGi3g1v0039200.2
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039200
Domains
13
LotjaGi3g1v0039300.1
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.2
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.3
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi3g1v0039300.4
– Udp-glucose 4,6-dehydratase; TAIR: AT1G78570.1 rhamnose biosynthesis 1; Swiss-Prot: sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; TrEMBL-Plants: tr|A0A1J7GF13|A0A1J7GF13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0039300
Domains
14
LotjaGi4g1v0218100.1
– 3,5-epimerase/4-reductase; TAIR: AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase; Swiss-Prot: sp|Q9LQ04|RMLCD_ARATH Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase; TrEMBL-Plants: tr|I3SMF8|I3SMF8_MEDTR 3,5-epimerase/4-reductase; Found in the gene: LotjaGi4g1v0218100
Domains
8
LotjaGi4g1v0218100.2
– 3,5-epimerase/4-reductase; TAIR: AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase; Swiss-Prot: sp|Q9LQ04|RMLCD_ARATH Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase; TrEMBL-Plants: tr|A0A067FK86|A0A067FK86_CITSI Uncharacterized protein; Found in the gene: LotjaGi4g1v0218100
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF51735 SUPERFAMILY 1 6.67