Domain Predictions — View

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cd01132

Source: CDD

Description

F1_ATPase_alpha

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0032559 View details of GO:0032559 AmiGO InterPro QuickGO	Molecular function	Adenyl ribonucleotide binding	Interacting selectively and non-covalently with an adenyl ribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.	Subterm of GO:0030554 GO:0032555

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0124339.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi\|372450305\|ref\|YP_005090487.1\|	Domains G3DSA:1.20.150.20 G3DSA:3.40.50.300 IPR000194 IPR000793 IPR005294 IPR020003 IPR027417 IPR033732 MF_01346 PF00006 PF00306 PS00152 PTHR15184 PTHR15184:SF3 SSF47917 SSF52540 TIGR00962 cd01132	18
Ljchlorog3v0000470.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP synthase CF1 alpha subunit [Lotus japonicus] gi\|13518443\|ref\|NP_084803.1\|	Domains G3DSA:1.20.150.20 G3DSA:2.40.30.20 G3DSA:3.40.50.300 IPR000194 IPR000793 IPR004100 IPR005294 IPR020003 IPR023366 IPR027417 IPR033732 MF_01346 PF00006 PF00306 PF02874 PIRSF039088 PS00152 PTHR15184 PTHR15184:SF42 SSF47917 SSF50615 SSF52540 TIGR00962 cd01132	24
Ljmitog3v0000450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi\|372450305\|ref\|YP_005090487.1\|	Domains G3DSA:1.20.150.20 G3DSA:2.40.30.20 G3DSA:3.40.50.300 IPR000194 IPR000793 IPR004100 IPR005294 IPR020003 IPR023366 IPR027417 IPR033732 MF_01346 PF00006 PF00306 PF02874 PIRSF039088 PS00152 PTHR15184 PTHR15184:SF3 SSF47917 SSF50615 SSF52540 TIGR00962 cd01132	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01132	CDD	1	33.33