Domain Predictions — View

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SSF50615

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0046034 View details of GO:0046034 AmiGO InterPro QuickGO	Biological process	ATP metabolic process	The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.	Subterm of GO:0009150 GO:0009167 GO:0009205 GO:0017144
GO:1902600 View details of GO:1902600 AmiGO InterPro QuickGO	Biological process	Proton transmembrane transport	The directed movement of a proton across a membrane.	Subterm of GO:0015672 GO:0098662

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Ljchlorog3v0000060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP synthase CF1 beta subunit [Lotus japonicus] gi\|13518421\|ref\|NP_084781.1\|	Domains Coil G3DSA:1.10.1140.10 G3DSA:2.40.10.170 G3DSA:3.40.50.300 IPR000194 IPR003593 IPR004100 IPR005722 IPR020003 IPR024034 IPR027417 MF_01347 PF00006 PF02874 PS00152 PTHR15184 PTHR15184:SF43 SM00382 SSF47917 SSF50615 SSF52540 TIGR01039 cd01133	23
Ljchlorog3v0000470.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP synthase CF1 alpha subunit [Lotus japonicus] gi\|13518443\|ref\|NP_084803.1\|	Domains G3DSA:1.20.150.20 G3DSA:2.40.30.20 G3DSA:3.40.50.300 IPR000194 IPR000793 IPR004100 IPR005294 IPR020003 IPR023366 IPR027417 IPR033732 MF_01346 PF00006 PF00306 PF02874 PIRSF039088 PS00152 PTHR15184 PTHR15184:SF42 SSF47917 SSF50615 SSF52540 TIGR00962 cd01132	24
Ljmitog3v0000450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi\|372450305\|ref\|YP_005090487.1\|	Domains G3DSA:1.20.150.20 G3DSA:2.40.30.20 G3DSA:3.40.50.300 IPR000194 IPR000793 IPR004100 IPR005294 IPR020003 IPR023366 IPR027417 IPR033732 MF_01346 PF00006 PF00306 PF02874 PIRSF039088 PS00152 PTHR15184 PTHR15184:SF3 SSF47917 SSF50615 SSF52540 TIGR00962 cd01132	24
LotjaGi3g1v0341700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP synthase subunit beta; TAIR: AT1G78900.1 vacuolar ATP synthase subunit A; Swiss-Prot: sp\|Q9SM09\|VATA_CITUN V-type proton ATPase catalytic subunit A; TrEMBL-Plants: tr\|A0A072URM9\|A0A072URM9_MEDTR Archaeal/vacuolar-type H+-ATPase subunit A; Found in the gene: LotjaGi3g1v0341700	Domains Coil G3DSA:1.10.1140.10 G3DSA:2.40.30.20 G3DSA:2.40.50.100 G3DSA:3.40.50.300 IPR000194 IPR004100 IPR005725 IPR020003 IPR022878 IPR023366 IPR024034 IPR027417 IPR031686 IPR036121 MF_00309 PF00006 PF02874 PF16886 PS00152 PTHR43607 SSF47917 SSF50615 SSF52540 TIGR01042 cd01134 cd18111 cd18119	28
LotjaGi5g1v0332700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP synthase subunit beta; TAIR: AT5G08680.1 ATP synthase alpha/beta family protein; Swiss-Prot: sp\|P17614\|ATPBM_NICPL ATP synthase subunit beta, mitochondrial; TrEMBL-Plants: tr\|A0A0L9TFH9\|A0A0L9TFH9_PHAAN ATP synthase subunit beta; Found in the gene: LotjaGi5g1v0332700	Domains G3DSA:1.10.1140.10 G3DSA:2.40.10.170 G3DSA:3.40.50.300 IPR000194 IPR003593 IPR004100 IPR005722 IPR020003 IPR020971 IPR024034 IPR027417 IPR036121 MF_01347 NON_CYTOPLASMIC_DOMAIN PF00006 PF02874 PF11421 PIRSF039072 PS00152 PTHR15184 PTHR15184:SF56 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF47917 SSF50615 SSF52540 SignalP-TM TIGR01039 cd01133 cd18110 cd18115 mobidb-lite	35

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00