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IPR020003

Description

IPR020003 is a ATPase, alpha/beta subunit, nucleotide-binding domain, active site.

<p>Transmembrane ATPases are membrane-bound enzyme complexes/ion transporters that use ATP hydrolysis to drive the transport of protons across a membrane. Some transmembrane ATPases also work in reverse, harnessing the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP.</p> <p>This group of proteins include the alpha and beta subunits found in the F1, V1, and A1 complexes of F-, V- and A-ATPases, respectively (sometimes called the A and B subunits in V- and A-ATPases), as well as Type 3 secretion system ATPase and Flagellum-specific ATP synthase.</p> <p>This entry represents a 10 amino acid signature. The signature pattern contains two conserved serines. The first serine seems to be important for catalysis - in the ATPase alpha-chain at least - as its mutagenesis causes catalytic impairment.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Associated Lotus transcripts 20

Transcript Name Description Predicted domains Domain count
ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi|372450305|ref|YP_005090487.1| 18
PREDICTED: V-type proton ATPase subunit B 1-like [Glycine max] gi|356575458|ref|XP_003555858.1| 16
PREDICTED: V-type proton ATPase catalytic subunit A-like [Cicer arietinum] gi|502149512|ref|XP_004507557.1| 14
PREDICTED: ATP synthase subunit beta, mitochondrial-like [Glycine max] gi|356575611|ref|XP_003555932.1| 17
PREDICTED: V-type proton ATPase subunit B 1-like isoform 1 [Glycine max] gi|356536392|ref|XP_003536722.1| 17
ATP synthase CF1 beta subunit [Lotus japonicus] gi|13518421|ref|NP_084781.1| 23
ATP synthase CF1 alpha subunit [Lotus japonicus] gi|13518443|ref|NP_084803.1| 24
ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi|372450305|ref|YP_005090487.1| 24
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1NF84|I1NF84_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491400 19
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400 14
ATP synthase subunit beta; TAIR: AT4G38510.1 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400 19
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|G7KSI7|G7KSI7_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi1g1v0491400 14
ATP synthase subunit beta; TAIR: AT1G78900.1 vacuolar ATP synthase subunit A; Swiss-Prot: sp|Q9SM09|VATA_CITUN V-type proton ATPase catalytic subunit A; TrEMBL-Plants: tr|A0A072URM9|A0A072URM9_MEDTR Archaeal/vacuolar-type H+-ATPase subunit A; Found in the gene: LotjaGi3g1v0341700 28
ATP synthase subunit beta; TAIR: ATCG00480.1 ATP synthase subunit beta (ChrC); Swiss-Prot: sp|Q4VZI5|ATPB_CUCSA ATP synthase subunit beta, chloroplastic; TrEMBL-Plants: tr|M0ZKF0|M0ZKF0_SOLTU Uncharacterized protein; Found in the gene: LotjaGi4g1v0210300 21
ATP synthase subunit beta; TAIR: ATCG00480.1 ATP synthase subunit beta (ChrC); Swiss-Prot: sp|Q4VZI5|ATPB_CUCSA ATP synthase subunit beta, chloroplastic; TrEMBL-Plants: tr|M0ZKF0|M0ZKF0_SOLTU Uncharacterized protein; Found in the gene: LotjaGi4g1v0210300 21
ATP synthase subunit beta; TAIR: AT5G08680.1 ATP synthase alpha/beta family protein; Swiss-Prot: sp|P17614|ATPBM_NICPL ATP synthase subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0L9TFH9|A0A0L9TFH9_PHAAN ATP synthase subunit beta; Found in the gene: LotjaGi5g1v0332700 35
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1LF60|I1LF60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350100 19
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|I1LF60|I1LF60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350100 19
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|A0A072VSL4|A0A072VSL4_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi5g1v0350100 14
ATP synthase subunit beta; TAIR: AT4G38510.5 ATPase, V1 complex, subunit B protein; Swiss-Prot: sp|Q9SZN1|VATB2_ARATH V-type proton ATPase subunit B2; TrEMBL-Plants: tr|A0A072VSL4|A0A072VSL4_MEDTR Archaeal/vacuolar-type H+-ATPase subunit B; Found in the gene: LotjaGi5g1v0350100 14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18112 CDD 1 5.00