Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd01359

Source: CDD

Description

Argininosuccinate_lyase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004056 View details of GO:0004056 AmiGO InterPro QuickGO	Molecular function	Argininosuccinate lyase activity	Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine.	Subterm of GO:0016842
GO:0042450 View details of GO:0042450 AmiGO InterPro QuickGO	Biological process	Arginine biosynthetic process via ornithine	The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.	Subterm of GO:0006526 GO:0006591

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1558980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Argininosuccinate lyase [Medicago truncatula] gi\|357465245\|ref\|XP_003602904.1\|	Domains G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR029419 PF00206 PF14698 PR00145 PR00149 PS00163 PTHR11444 PTHR11444:SF3 SSF48557 TIGR00838 cd01359	18
Lj1g3v1558980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: argininosuccinate lyase-like [Glycine max] gi\|356508027\|ref\|XP_003522764.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR024083 IPR029419 MF_00006 NON_CYTOPLASMIC_DOMAIN PF00206 PF14698 PR00145 PR00149 PS00163 PTHR11444 PTHR11444:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 TIGR00838 cd01359 mobidb-lite	27
LotjaGi1g1v0346000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Argininosuccinate lyase; TAIR: AT5G10920.1 L-Aspartase-like family protein; Swiss-Prot: sp\|Q9LEU8\|ARLY_ARATH Argininosuccinate lyase, chloroplastic; TrEMBL-Plants: tr\|I1JV68\|I1JV68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346000	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR024083 IPR029419 MF_00006 NON_CYTOPLASMIC_DOMAIN PF00206 PF14698 PR00145 PR00149 PS00163 PTHR43814 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 TIGR00838 cd01359 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33