Domain Predictions — View

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PTHR11444

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004333 View details of GO:0004333 AmiGO InterPro QuickGO	Molecular function	Fumarate hydratase activity	Catalysis of the reaction: (S)-malate = fumarate + H(2)O.	Subterm of GO:0016836
GO:0006106 View details of GO:0006106 AmiGO InterPro QuickGO	Biological process	Fumarate metabolic process	The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.	Subterm of GO:0043648
GO:0045239 View details of GO:0045239 AmiGO InterPro QuickGO	Cellular component	Tricarboxylic acid cycle enzyme complex	Any of the heteromeric enzymes that act in the TCA cycle.	Subterm of GO:0032991 GO:0044444

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1558980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Argininosuccinate lyase [Medicago truncatula] gi\|357465245\|ref\|XP_003602904.1\|	Domains G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR029419 PF00206 PF14698 PR00145 PR00149 PS00163 PTHR11444 PTHR11444:SF3 SSF48557 TIGR00838 cd01359	18
Lj1g3v1558980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: argininosuccinate lyase-like [Glycine max] gi\|356508027\|ref\|XP_003522764.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR024083 IPR029419 MF_00006 NON_CYTOPLASMIC_DOMAIN PF00206 PF14698 PR00145 PR00149 PS00163 PTHR11444 PTHR11444:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 TIGR00838 cd01359 mobidb-lite	27
Lj1g3v3023880.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: kinesin-4-like [Fragaria vesca subsp]. vesca] gi\|470109066\|ref\|XP_004290823.1\|	Domains G3DSA:1.20.200.10 IPR000362 IPR008948 IPR022761 PF00206 PTHR11444 PTHR11444:SF20 SSF48557	8
Lj1g3v4139420.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: adenylosuccinate lyase-like [Glycine max] gi\|356501123\|ref\|XP_003519378.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR004769 IPR008948 IPR013539 IPR020557 IPR022761 IPR024083 PF00206 PF08328 PR00149 PS00163 PTHR11444 PTHR11444:SF17 SSF48557 TIGR00928 cd01598	19
Lj5g3v1602390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: fumarate hydratase 1, mitochondrial-like [Glycine max] gi\|356500262\|ref\|XP_003518952.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR005677 IPR008948 IPR018951 IPR020557 IPR022761 IPR024083 MF_00743 NON_CYTOPLASMIC_DOMAIN PF00206 PF10415 PR00149 PS00163 PTHR11444 PTHR11444:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 SignalP-TM_GRAM_POSITIVE TIGR00979 cd01362	26
LotjaGi5g1v0248000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fumarate hydratase, class II; TAIR: AT2G47510.1 fumarase 1; Swiss-Prot: sp\|P93033\|FUM1_ARATH Fumarate hydratase 1, mitochondrial; TrEMBL-Plants: tr\|V7BJH7\|V7BJH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0248000	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR005677 IPR008948 IPR018951 IPR020557 IPR022761 IPR024083 MF_00743 NON_CYTOPLASMIC_DOMAIN PF00206 PF10415 PR00149 PS00163 PTHR11444 PTHR11444:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 SignalP-TM TIGR00979 cd01362	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01362	CDD	1	16.67