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IPR024083

Description

IPR024083 is a Fumarase/histidase, N-terminal.

<p>This entry represents an N-terminal structural domain which forms an α-helical orthogonal bundle found in fumarate lyase (fumarase) and related proteins, as well as in histidine ammonia-lyase (or histidase) [[cite:PUB00023551]].</p> <p>One member of the fumarate lyase family is L-aspartate ammonia-lyase (aspartase), which catalyses the reversible deamination of the amino acid L-aspartic acid, using a carbanion mechanism to produce fumaric acid and ammonium ion. Aspartases from different organisms show high sequence homology, and this homology extends to functionally related enzymes such as the class II fumarases, the argininosuccinate and adenylosuccinate lyases. The high-resolution structure of aspartase reveals a monomer that is composed of three domains oriented in an elongated S-shape [[cite:PUB00011785]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 54

Transcript Name Description Predicted domains Domain count
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 6
PREDICTED: phenylalanine ammonia-lyase 2-like isoform X1 [Cicer arietinum] gi|502118418|ref|XP_004496257.1| 10
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142394|dbj|BAF36972.1| 16
PREDICTED: argininosuccinate lyase-like [Glycine max] gi|356508027|ref|XP_003522764.1| 27
PREDICTED: adenylosuccinate lyase-like [Glycine max] gi|356501123|ref|XP_003519378.1| 19
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142390|dbj|BAF36970.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142390|dbj|BAF36970.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142384|dbj|BAF36967.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
PREDICTED: phenylalanine ammonia-lyase class 3-like [Cicer arietinum] gi|502100067|ref|XP_004491627.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 16
16
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142392|dbj|BAF36971.1| 6
Phenylalanine ammonia-lyase [Lotus japonicus] gi|118142402|dbj|BAF36976.1| 17
PREDICTED: fumarate hydratase 1, mitochondrial-like [Glycine max] gi|356500262|ref|XP_003518952.1| 26
PREDICTED: phenylalanine ammonia-lyase 2-like isoform X1 [Cicer arietinum] gi|502118418|ref|XP_004496257.1| 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P19143|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr|A0A0R4J2S3|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P19143|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr|A0A0R4J2S3|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P19143|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr|A0A0R4J2S3|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200 16
Adenylosuccinate lyase; TAIR: AT1G36280.1 L-Aspartase-like family protein; Swiss-Prot: sp|P44797|PUR8_HAEIN Adenylosuccinate lyase; TrEMBL-Plants: tr|V7B898|V7B898_PHAVU Adenylosuccinate lyase; Found in the gene: LotjaGi1g1v0081500 19
Argininosuccinate lyase; TAIR: AT5G10920.1 L-Aspartase-like family protein; Swiss-Prot: sp|Q9LEU8|ARLY_ARATH Argininosuccinate lyase, chloroplastic; TrEMBL-Plants: tr|I1JV68|I1JV68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346000 26
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ0|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ0|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ0|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ3|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ3|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ3|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ3|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi3g1v0071500 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ9|A0PBZ9_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0080000 17
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|P27991|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ5|A0PBZ5_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0102000 16
Fumarate hydratase, class II; TAIR: AT2G47510.1 fumarase 1; Swiss-Prot: sp|P93033|FUM1_ARATH Fumarate hydratase 1, mitochondrial; TrEMBL-Plants: tr|V7BJH7|V7BJH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0248000 26
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|Q9SMK9|PAL2_CICAR Phenylalanine ammonia-lyase 2; TrEMBL-Plants: tr|K7N485|K7N485_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0272900 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|Q01861|PAL1_PEA Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi6g1v0093700 16
Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp|Q01861|PAL1_PEA Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr|A0PBZ4|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi6g1v0093700 16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00332 CDD 1 1.85