Domain Predictions — View

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IPR024083

Source: InterPro

Description

IPR024083 is a Fumarase/histidase, N-terminal.

<p>This entry represents an N-terminal structural domain which forms an α-helical orthogonal bundle found in fumarate lyase (fumarase) and related proteins, as well as in histidine ammonia-lyase (or histidase) [[cite:PUB00023551]].</p> <p>One member of the fumarate lyase family is L-aspartate ammonia-lyase (aspartase), which catalyses the reversible deamination of the amino acid L-aspartic acid, using a carbanion mechanism to produce fumaric acid and ammonium ion. Aspartases from different organisms show high sequence homology, and this homology extends to functionally related enzymes such as the class II fumarases, the argininosuccinate and adenylosuccinate lyases. The high-resolution structure of aspartase reveals a monomer that is composed of three domains oriented in an elongated S-shape [[cite:PUB00011785]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 54

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0121549.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj0g3v0121559.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj0g3v0245929.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.275.10 IPR008948 IPR024083 PTHR10362 PTHR10362:SF19 SSF48557	6
Lj0g3v0269169.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: phenylalanine ammonia-lyase 2-like isoform X1 [Cicer arietinum] gi\|502118418\|ref\|XP_004496257.1\|	Domains G3DSA:1.10.275.10 IPR001106 IPR008948 IPR022313 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557	10
Lj0g3v0350889.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142394\|dbj\|BAF36972.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v1558980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: argininosuccinate lyase-like [Glycine max] gi\|356508027\|ref\|XP_003522764.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR024083 IPR029419 MF_00006 NON_CYTOPLASMIC_DOMAIN PF00206 PF14698 PR00145 PR00149 PS00163 PTHR11444 PTHR11444:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 TIGR00838 cd01359 mobidb-lite	27
Lj1g3v4139420.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: adenylosuccinate lyase-like [Glycine max] gi\|356501123\|ref\|XP_003519378.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR004769 IPR008948 IPR013539 IPR020557 IPR022761 IPR024083 PF00206 PF08328 PR00149 PS00163 PTHR11444 PTHR11444:SF17 SSF48557 TIGR00928 cd01598	19
Lj1g3v4590760.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142390\|dbj\|BAF36970.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v4590760.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v4590770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142390\|dbj\|BAF36970.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v4590840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142384\|dbj\|BAF36967.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v4590850.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj1g3v4590850.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj2g3v3339740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: phenylalanine ammonia-lyase class 3-like [Cicer arietinum] gi\|502100067\|ref\|XP_004491627.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj3g3v0602620.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj3g3v0602630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj3g3v0602640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
Lj3g3v0602650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142392\|dbj\|BAF36971.1\|	Domains G3DSA:1.10.275.10 IPR008948 IPR024083 PTHR10362 PTHR10362:SF19 SSF48557	6
Lj5g3v0659760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase [Lotus japonicus] gi\|118142402\|dbj\|BAF36976.1\|	Domains Coil G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	17
Lj5g3v1602390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: fumarate hydratase 1, mitochondrial-like [Glycine max] gi\|356500262\|ref\|XP_003518952.1\|	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR005677 IPR008948 IPR018951 IPR020557 IPR022761 IPR024083 MF_00743 NON_CYTOPLASMIC_DOMAIN PF00206 PF10415 PR00149 PS00163 PTHR11444 PTHR11444:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 SignalP-TM_GRAM_POSITIVE TIGR00979 cd01362	26
Lj5g3v1811400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: phenylalanine ammonia-lyase 2-like isoform X1 [Cicer arietinum] gi\|502118418\|ref\|XP_004496257.1\|	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF19 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0004200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P19143\|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr\|A0A0R4J2S3\|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF39 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0004200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P19143\|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr\|A0A0R4J2S3\|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF39 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0004200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P19143\|PAL3_PHAVU Phenylalanine ammonia-lyase class 3; TrEMBL-Plants: tr\|A0A0R4J2S3\|A0A0R4J2S3_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0004200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF39 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0081500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Adenylosuccinate lyase; TAIR: AT1G36280.1 L-Aspartase-like family protein; Swiss-Prot: sp\|P44797\|PUR8_HAEIN Adenylosuccinate lyase; TrEMBL-Plants: tr\|V7B898\|V7B898_PHAVU Adenylosuccinate lyase; Found in the gene: LotjaGi1g1v0081500	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR004769 IPR008948 IPR013539 IPR020557 IPR022761 IPR024083 PF00206 PF08328 PR00149 PS00163 PTHR43411 PTHR43411:SF4 SSF48557 TIGR00928 cd01598	19
LotjaGi1g1v0346000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Argininosuccinate lyase; TAIR: AT5G10920.1 L-Aspartase-like family protein; Swiss-Prot: sp\|Q9LEU8\|ARLY_ARATH Argininosuccinate lyase, chloroplastic; TrEMBL-Plants: tr\|I1JV68\|I1JV68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346000	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR008948 IPR009049 IPR020557 IPR022761 IPR024083 IPR029419 MF_00006 NON_CYTOPLASMIC_DOMAIN PF00206 PF14698 PR00145 PR00149 PS00163 PTHR43814 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 TIGR00838 cd01359 mobidb-lite	26
LotjaGi1g1v0690200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.10 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ0\|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ0\|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ0\|A0PBZ0_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690200.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690200	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ3\|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.10 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.11 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ3\|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ3\|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ3\|A0PBZ3_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi1g1v0690300.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi1g1v0690300	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi3g1v0071500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi3g1v0071500	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi5g1v0080000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ9\|A0PBZ9_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0080000	Domains Coil G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	17
LotjaGi5g1v0102000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|P27991\|PAL1_SOYBN Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ5\|A0PBZ5_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0102000	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi5g1v0248000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fumarate hydratase, class II; TAIR: AT2G47510.1 fumarase 1; Swiss-Prot: sp\|P93033\|FUM1_ARATH Fumarate hydratase 1, mitochondrial; TrEMBL-Plants: tr\|V7BJH7\|V7BJH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0248000	Domains G3DSA:1.10.275.10 G3DSA:1.10.40.30 G3DSA:1.20.200.10 IPR000362 IPR005677 IPR008948 IPR018951 IPR020557 IPR022761 IPR024083 MF_00743 NON_CYTOPLASMIC_DOMAIN PF00206 PF10415 PR00149 PS00163 PTHR11444 PTHR11444:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48557 SignalP-TM TIGR00979 cd01362	26
LotjaGi5g1v0272900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|Q9SMK9\|PAL2_CICAR Phenylalanine ammonia-lyase 2; TrEMBL-Plants: tr\|K7N485\|K7N485_SOYBN Phenylalanine ammonia-lyase; Found in the gene: LotjaGi5g1v0272900	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF47 SSF48557 TIGR01226 cd00332	16
LotjaGi6g1v0093700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|Q01861\|PAL1_PEA Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi6g1v0093700	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16
LotjaGi6g1v0093700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine ammonia-lyase; TAIR: AT2G37040.1 PHE ammonia lyase 1; Swiss-Prot: sp\|Q01861\|PAL1_PEA Phenylalanine ammonia-lyase 1; TrEMBL-Plants: tr\|A0PBZ4\|A0PBZ4_LOTJA Phenylalanine ammonia-lyase; Found in the gene: LotjaGi6g1v0093700	Domains G3DSA:1.10.274.20 G3DSA:1.10.275.10 G3DSA:1.20.200.10 IPR001106 IPR005922 IPR008948 IPR022313 IPR023144 IPR024083 PF00221 PS00488 PTHR10362 PTHR10362:SF45 SSF48557 TIGR01226 cd00332	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00332	CDD	1	1.85