Domain Predictions — View

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cd02079

Source: CDD

Description

P-type_ATPase_HM

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0100100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G37270.1 heavy metal atpase 1; Swiss-Prot: sp\|Q9M3H5\|HMA1_ARATH Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic; TrEMBL-Plants: tr\|A0A0B2P4P0\|A0A0B2P4P0_GLYSO Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic; Found in the gene: LotjaGi4g1v0100100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PTHR43079 PTHR43079:SF1 SFLDF00027 SFLDG00002 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	30
LotjaGi4g1v0100100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G37270.1 heavy metal atpase 1; Swiss-Prot: sp\|Q9M3H5\|HMA1_ARATH Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic; TrEMBL-Plants: tr\|K7MM17\|K7MM17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PTHR43079 PTHR43079:SF1 SSF56784 SSF81653 SSF81665 TIGR01494 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	26
LotjaGi4g1v0304700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT2G19110.1 heavy metal atpase 4; Swiss-Prot: sp\|O64474\|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4; TrEMBL-Plants: tr\|K7LWU0\|K7LWU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0304800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00120 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi6g1v0241300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A151RDQ6\|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF5 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02079	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02079	CDD	1	16.67