Domain Predictions — View

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TIGR01512

Source: TIGRFAM

Description

ATPase-IB2_Cd: cadmium-translocating P-type ATPase

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2133900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi\|356550732\|ref\|XP_003543738.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023299 IPR027256 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS50846 PTHR24093 PTHR24093:SF318 SSF55008 SSF81653 SSF81660 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE	29
Lj6g3v1371840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi\|356532650\|ref\|XP_003534884.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023299 IPR027256 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PS50846 PTHR24093 PTHR24093:SF318 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371	31
LotjaGi4g1v0034800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp\|Q9SZC9\|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0JZ81\|A0A0R0JZ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PTHR43520 PTHR43520:SF22 SFLDF00027 SFLDG00002 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE	31
LotjaGi4g1v0034800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp\|Q9SZC9\|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr\|I1KR29\|I1KR29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF22 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi4g1v0304700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT2G19110.1 heavy metal atpase 4; Swiss-Prot: sp\|O64474\|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4; TrEMBL-Plants: tr\|K7LWU0\|K7LWU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0304800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00120 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi6g1v0241300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A151RDQ6\|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF5 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02079	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02079	CDD	1	12.50