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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0100100 |
| Transcript ID | LotjaGi4g1v0100100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Copper-transporting ATPase; TAIR: AT4G37270.1 heavy metal atpase 1; Swiss-Prot: sp|Q9M3H5|HMA1_ARATH Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic; TrEMBL-Plants: tr|K7MM17|K7MM17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13635415..13643610) extracted from Lotus japonicus Gifu genome v1.2.
CTCAATATGGAAGCAGTTTCTTATTCAATTCCCTCCTCTACCAAATTCCAATCACTTCATATTTACACCAAACCCACTCG CTCCAAACTCACTCTTCGCCCGCATCAAATTTCAATCAAACCTTTCTATTCTTCCAAATTCCTCATTCTCCACCACCACC GCCTCCGCTGCGTCGCCGCCGAATCCACCAGTAACCACCACCACAATCATAACCACCATGACCACCACCACGACCACGAG CACCACCATAATCACCACCACCATCATCACCACCACTCACACGGCACCGATGACGCCAATCTCACGGGGCCGCAAAAAGC GATCATCGGGTTCGCCAAAGCCACTAGATGGATGGACTTGGCGAATGTCCTGAGGGAGCATTTGCATCTATGCTGCATCT CCGCGGCTTTGTTCGTCGCCGCCGCGATTTGCCCTCACACCTTGCCTAAACCCTTGATCAAGCCTTTGCAAAACACACTC ATTTTCATGGCTTTTCCTTTGGTTGGGGTGAGGAACATTCTCTTCTCTCACTCGTTTATATTGTTCATGTCTTTAGAATT GTATTAGACTCACTGAATTGTGACTTAGGCCCTGTTTTGAAGAGCTTATTTGATCTTAATAGCATAAGCGCTTATGTCAG TGTTTCTGAGAGCTTATGCAAATAGCGGATGACCTACCCTAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCATGATAG CTTATGAAAAAGGGTTTATGCTTATTTTCAATTTAATTCAATAATTTTTTTAAAATAGCTTATGTCATAAGCGCTTATGA TCATAAGTGGTTAATTAAGTTGTTTTCCCAAACGGGACCTTAATGTGTGTGTTTGTATCAGGTTTCTGCGTCACTTGATG CTCTTATTGAAATTAGTAGTGGAAAAGTGACTATCCATGTGTTAATGGCAATGGCTGCCTTTGCATCGATATTTATGGGA AATGCTGTGGAAGGAGGGTTACTTCTTGCCATGTTTAATCTCGCGCATATAGGTGAGCTAGTATTCGGGTTAACACGTTT CCTGAAATACGTTTTACGTAGCTAGGTTCAGGATTCTGTAGTGCGCGATATGATTGATTTTTCTTATAAGTGAATGGTTT CTGCAGCTGAAGAGTATTTCACCGGCCGTTCGATGGTTGATGTTAAAGAGTTGAAGGAGAATTATCCAGATTTTGTGCTT GTTTTGGATACGAAGGATGATAAACTCCCTAACACAGTTGACTTGGCATACAAGAGAGTTCCCGTGCATGATGTGACTGT AGGATCATATATTCTGGTTGGTGCTGGCGAGGTAAGTTTGAGTAATCATGTTGCTTCACAATTATTTGAAATGAATCGGT TCAATATAACTATTAATTTCCTTCAAATTCTAGATGCTCATCAAACACATATCTGCAATATTTGGAATTGAAGTTTTATA TATCAGACTTTTGAAGTATATCAGATTATTGAAGTATAATGGAGATGGTATTGTGATTAGTCTGTGCCTGTAGATTGTGA AGTTTTCCAAGGCGGTGCTACAATTACCATTGAGCATTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAGGTTGGAGATA GAATTCCTGGTGGTGCTCGGAACTTAGATGGTAGAATAATTGTAAAGGTATGTTCAATTATATGTCTGGGCTTTTCAGCA GCTTTTTTGTATTCTATTAAATTTCAGAGTTTTGCCTCTATATTTACAATTGAAAAAGTTGTAGTAATGTTGGTAGTATG AGAAACAGATGCGAATAATTGCAGCTGGGGCTAGGTGTGATGGATGTGGTGCGGTGACTGGTTGGTGATTGATGATACAG TGGGGAGAAGAAGGTCATACTTTTGGTGTTGATGGGTGGGAAACAATAGTATTAACTATTAATAAGGTGGTAGCAATGCA ATAGAAAAATTAATCTTATAGCAGCTATGGTGATTGGTTTTTTTCAATATATATTGTTTTAAGAGGATGGCTGTAAAGAT TTTGCATAAACTGCTTGTTCTGAGGTTGCTAGGTGGTGATCAGGATGAGTGGAGTTTGTCAGTAATGGTTCTGTCTAGTT CAACACTTCAACTTGTTTTTGAATGGATGCTTGTTCTGTTTACAGTATGATTTGTTTGGAACTCACTACAATGTACAAAA TTATTTAATCATAGGTGATGAAGACATGGAAGGAATCAACACTCAGCAGAATTGTGCAGTTGACTGAAGAAGCGCAGTTG AATAGACCTAACCTTCAAAGGTGGCTGGATAAATTTGGTGAACGTTACAGCAGAGTTGTTGTGGTGTTATCAATTGCTGT TGCTGTTATTGGACCACTTGTATTTAAGTGGCCATTCTTTAGTACACCAGGTAATTTTAAAATTCTTTTACTCTAGTAGT GATGTACAATATGATTTCTAAATTTTTAAAATTTGCATGCTATCATTCGTGGGATCAGGCTTTCTTTTACTCTAGTAGTA TTTTTACTTCTTTCTTTATCCTTGTATAGACTTGGAGAATAGGTACATAACAGAAGTCTTAACTTATAGACGTTCTGTTT ATTAATGTTATACTACATTTGTTATCACCAATTTTATAAAGTGCTTACTATCTCTGTTTTCTTAATTTTGTCTTTGTTGA AGGCAATAGTATCCTAAAATTATGTTGTTGCCCGTCTATGTATGACTTTTCATATTTCAGCTTATGTAGTTTATGGTTGT TGTAGCTTGCAGAGGTTCAATTTACAGAGCCCTAGGGCTCATGGTTGCAGCATCACCGTGTGCCTTGGCTGTGGCCCCAT TGGCTTATGCTACAGCAATAAGCTCCTGTGCAAAAAAGGTACTGGTTAACTACTAAGGGGCATCTTAATACACAATGTCA GAACGTGTTTCCAAATTTTAAATCATATATTGATTTCTATTTATATAATTCCCCCCCCCCCCTCCATTTTGGTAGAAGCA AGTTTTATCCTAGAGTTTCAATTATGAAGTTTTTACACGATATGATTTTGTTTTTTACTTTTTTATTTAACAAGTATTAG ACATTATATTTTCAACAATTGTAATCCTGAACCTTTTTAAAATCCTGCTTGTTTTTACTCTCAAATTATACTTGAATAAA TTGTTTAGGTATTATTTCTGAATCCTATTGGTAAATAGTGATATACTTGTAAATATTGTTATGAAAATTGAATCTTTTAG ATTATGCTGAATTTAGCATTTAAGTTTCCTATTTATCCAATTCAAGAAAGAATAAAAAGCTTTCACTAACTGGTGTAGGA AGTGTTAGAATATAAAAGGATATTTATAATATCTTGATGAATCTTAGAGTCATTCAGTACAAGTCAGATTATTCTTTAGG ATTGGTTTCTTTATTTTCTTATTTTCTTATTAGGATTTGGAATCTTAGTTAGTTTTCCTATTTGACTATGATTAGGAGTC TACCATTAGTATAAGGACAATTGTTTTGTCCTATGTAAGATCAAACCCAATACATTCTATCAATACAATTATACTCTTTG TTCCCTTTTCCACTTTCTATAAATCCTATTATTTCATCACGGTATCCGTGCGTTATGAACCTTTGAAACTAATTTTTAGT GGAATAAGCTGAATCAAATGGAATAGTTTGATTATCTGCTTTGTTGATCACATCGTTTAAGCCCCTCTTCTCAATCTCAT TGTCTATGTTTGTTGGTCTGAGTGAAGTATAAAGTTATCCAAAATTTACCAAAATAAGCACTAGATACACCTTTGTTTGT GGGTGTGACAGTTACCTCAATTTGCAGGGGATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTCATAC TATTGCATTTGACAAAACCGGGACATTGACAACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTATGGTCATCACA TTATAAACAAGGAAGCGAACATATCTTCCTGTTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATG GAAAAGGGCACTACCCACCCAATTGGAAGGTATTATTTTAACAGAATGTATTTGTGTTACTTTTGAATCCACCTTTTACA AGTTACAATCGTGTCTGTCATTGATCCTTAATCTTTCTATCATTCTTGTTTGAAATATAAAGGAAAACCACTCATGTGTC TTTAACCAATAGCTTATGCTTTTAGAATAGTTGGTTCATGACATGTTATCAGAGTCAATTCTAAATCCTTTATTGGGCCA CTCCTAATAGATCACCCGCAGAATTTTAAAGTTCAATAATCAATCTGACCCAGGATTGTTCCAAAAAAAATCGAAATCAA TCTGGTCCACGGTGTGTTAAAGTTTTAAATTGATTAGAGATCTAGAAAAAAAGTTCTTATGAAGAGTTGTGCAATTCTTA CACTTAAGCTAGCTTTTAGTTAGAGTCTATGTTGTCAATCGCGGATCGTGGAGCATTGCAACCAACCAAAAAACTGTGAT GGCGGGATCCTGCATAGCGGGCTGGCCACGAAACGGTGGTCGCCGGAGGTTTGTCGGAGAGAGTGCAGGATAGATAATGA GGGGTGGGTTGTGGAGACTTAGCAGGGAGAAGTTTCTGTTATGTGGGATGGGTGCCAAATGTAGCTCTCCAAATCGAAGA CCCTTCCTGTTTCTTTTGGCCTATTTTTTTGTATTGAAATCCCCAATCCACCCATAAAAAAACCGTAAAGCGTTTAAAAT ACAAGGATATTTCCGAGATTTCACGTGTCATCTTTCGAAATCCCTAATATACGCTTAAAAACCCCTAAAATGTTTATAAT GCAAGGACTTTTAAGGGATTTCCCCTTTCATCCCTCCCTAACCTTGTGTCTCCCTCGTGCTGCGATCTCACGCTTTCCTC TGTTAAATAAGCCGCAACGGTCAAGTGAACCGCGATGGGACACACCGTCCCAGTGAGTGGCCGCGACGGACGGTGTGATC CCAGGGCAATCGCGCGCGATTAACAGCGTAGGGTAGAGTAAAACCTGACCCAAATTCTCAAGATGGTATCTAAGTTTGTT CCCTCTGTCCTATAATAAAAAGTTAAATTTCAGCACAAAGCCACAAACTAGGTGTGCTGGTGGATTATGAGGTAGCTTGA GGGGCTATGTTAGAAATATATTATAAAACCATTCACGTGTCTTCTTCACCCAACAGTTTAAGCTTTTGGGATAGTTGATT CATGATAATTCTTTTATCTCTTGAGGAAGAAGAGCAATAAGTTTTCTTTCTTTTTTGTGTTTCTCACTGGCTTGCAAGTG GATATGATATGAACCTTTCAATTCAATTCTTGAATGGTCAGTAATTCCATCTCAAATGTATAAATAAAGCATAATTATCT CTTTTAAATATTTATGCATTTTTTGTTCTGTAATATGAAATGCAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCC CATCTGTTTCTGTTGAAAGTTTTGAATACTTTCCTGGTAGAGGCCTGACTGCTACTGTTAACAGCATTGAGGTACCCGCA CCTCTCATCACCATTGGCATTGCCTGACCCATTACTTAAATATTTACTTTGCTTGACAAAGCCAAACATTATAATATAAA CTACCATTCATTGTTAGTATCCTGAGCTCCTATTCCATGCATCTCTAAGAGACCTCCCATTGTTTCCTTGTACACTTCTT GAAGTTGCGTGTTTCATTATTTGGCCACTTTTTTCTTTGTATATTTAGTGCTAACTAATGATGGGACCCTTGAAGTGACA TTTAATAAGATAAACTTCAGTATATACACATCTTCTTCCTGTGTAGTTTATCAAGCTTCATTTGTGAATGACGAGTTAAA TGACTCAAATTAATTTTTGTTTTGTTATAGTCAGGAAACGGAGGTGCTAAACTATTGAAAGCATCACTCGGGTCTGTAGA CTTCATCACTTCATTTTGTCAATCTGAAGACGAATTAAAAAAGATTAAGGAAGCTGTTGATACATCTTCCTATGGAGGAG AATTTGTCCATGCTGCCCTTTCAGTTAATCAGAAGGTACTGTACTGCTAGCTACACTTCTTTTCTTGGGGGAGGGGTAGT GCTTTGAGCATACCCAAGTCTTTCAACTTCTAGGGCCTCTTTAATTTGAAATATTAAATTTGGTCCTGTTTTCTTTTCAA TCCCTTTTTCCCAAACAAAACAGATTGAGCCTCAGTAAAATGATAATATGCTACTCTGTTTCATTCTCAACAGGTTCCAC CTCAACCTAACTGACTATCCGCTTGATGCAGGTAACATTGATTCATCTAGAGGACAGGCCTCGTCCAGGGGTTTTTAATG TTATTCAGGAGTTGCAAGATGAAGCAAAGCTTCGTGTGATGATGTTGACTGGTGATCATGAATCTAGTGCAAAGAGAGTT GCAAGTGCCGTGGGCATCAATGTGTTTCATTGCAATCTGAAGCCCGAAGATAAGCTGAGTCATGTAAAGGATATCTCAAG AGATATGGGTGAGTTCCTCCATTAGAGTTTTGTTTTAATCTTTTTTGTCTTTCATAACATGATTTACTGTTGGACGGATT TCAGTGCTATATACATGTTTATAATATTTTTCTTTTTTAACTACACACTATTGATTTCTTTCCAATATAAGTTCCATGCC CACTCACTTCTAGATTCAACTGTATGAGGAAATTTTTCAGAACTGAACACGCTTCACGTCTGACTCTTCTTTTATTGCAC CTTTTTTATCAGTGCTGCAACTACACATTCTTCTATTTATCATGAGACTATTTTCTTAACCAGGCTCCGGCATGATATTG ACTAAATTGAATTACATATTGTTGTACTCTTATGGCATTTTGTTTTTTCTCGTGACAGGGGGAGGCTTAATTATGGTTGG TGAAGGTATTAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGAATTGTTCTTGCACAACGTGCTAGTGCAACTGCCA TAGCTGTTGCAGATGTATTGTTACTTCGAGAAAATATTTCTGCAGTGCCTTTTTGTATTGCCAAGTCTCGTCAAACAACT TCACTGGTATTTTATATCAACTGTTATGAGACTTCATTTCTTCATCACTTGGATGTTGTTGTCTTATATGTGAATGCTCA TGCAGATTAAACAAAATGTGGCTCTGGCGTTGACCTCTATTATCATGGCTTCTCTTCCGTCAGTTTTAGGATTTGTGCCA TTGTGGTTAACGGTATGAAACTCAACTGACTTCGATGCTGGATCTTGATACTATTTGCCAGTCATGTTTTATTGTGGTTT TCTTTTGGCATTATGTCATCATGTAGTGAATGCCTTGAACGGAGTCTTGTTTTAAAAAAAAAACTTGTGATCAAAATTGG GCAAACCACCAATTTCATCTCAATTGTGTCACTATTTTTCAACTTAGTCCTTTTACAAAATTCTGATGAAAAGTAGTCCA CGAACTATCTCCGCATTCTTCACATTAGTCTTTGCTAAGGTAGTTTGGGAACTCACATGAACGGCAGGTACATAGTTCAG GTATTAATGTGAAAAATGGGAAATAGTTTGAGGACTACTTTTTGTGAGCATGTCGTATGAAGACTAAATTGAAAGAAGAT ATTAACATTGGGGGAAAGATCTCGGTGATTTGCTCGATCAGAATTCACATGACCATTCTAGTAAAGGATGCGTATGGCTG TGGCCAAACCGGTTTTACTGAGAACAGTCCCCCTTTCTCTTTTGGGAAAAAAATATTATTCAGCTGATCTTGTTCATTGA GTTCTTGCTAATTATTACATACCTAAGATTAATATCAATTTTAAAACTAAAGCACCTGTTTGATTTCAGAAAACATGTAA ATGTTTTGCAACATTGTTGAAAAATATACAAATTCTTTTACTCATCCCCTAACAAAGTATTATTCTTTGAGCCTCGCTGT GAAAATCTTCAAGCTTCCCCCTTAATTGCATGTCAAACCTTTTTGTTTGGTTTCTGTTTAATCAAGTCTCTGGTCTATCC TTTTACATGCATGCAGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCAATACGTGCTTTAAATGAAC CATCTTGGTCCTGGAAGCAGGATGTATTAAATTTGATTACCGAGGTTAAATCTAAACTCCTATCTCTGAGGACAAATATC ACTGGCCCAAGCAGCATCACAACGGCAAAATTGTGA
CDS sequence (LotjaGi4g1v0100100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCAGTTTCTTATTCAATTCCCTCCTCTACCAAATTCCAATCACTTCATATTTACACCAAACCCACTCGCTCCAA ACTCACTCTTCGCCCGCATCAAATTTCAATCAAACCTTTCTATTCTTCCAAATTCCTCATTCTCCACCACCACCGCCTCC GCTGCGTCGCCGCCGAATCCACCAGTAACCACCACCACAATCATAACCACCATGACCACCACCACGACCACGAGCACCAC CATAATCACCACCACCATCATCACCACCACTCACACGGCACCGATGACGCCAATCTCACGGGGCCGCAAAAAGCGATCAT CGGGTTCGCCAAAGCCACTAGATGGATGGACTTGGCGAATGTCCTGAGGGAGCATTTGCATCTATGCTGCATCTCCGCGG CTTTGTTCGTCGCCGCCGCGATTTGCCCTCACACCTTGCCTAAACCCTTGATCAAGCCTTTGCAAAACACACTCATTTTC ATGGCTTTTCCTTTGGTTGGGGTTTCTGCGTCACTTGATGCTCTTATTGAAATTAGTAGTGGAAAAGTGACTATCCATGT GTTAATGGCAATGGCTGCCTTTGCATCGATATTTATGGGAAATGCTGTGGAAGGAGGGTTACTTCTTGCCATGTTTAATC TCGCGCATATAGCTGAAGAGTATTTCACCGGCCGTTCGATGGTTGATGTTAAAGAGTTGAAGGAGAATTATCCAGATTTT GTGCTTGTTTTGGATACGAAGGATGATAAACTCCCTAACACAGTTGACTTGGCATACAAGAGAGTTCCCGTGCATGATGT GACTGTAGGATCATATATTCTGGTTGGTGCTGGCGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGCGGTGCTACAA TTACCATTGAGCATTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAGGTTGGAGATAGAATTCCTGGTGGTGCTCGGAAC TTAGATGGTAGAATAATTGTAAAGGTGATGAAGACATGGAAGGAATCAACACTCAGCAGAATTGTGCAGTTGACTGAAGA AGCGCAGTTGAATAGACCTAACCTTCAAAGGTGGCTGGATAAATTTGGTGAACGTTACAGCAGAGTTGTTGTGGTGTTAT CAATTGCTGTTGCTGTTATTGGACCACTTGTATTTAAGTGGCCATTCTTTAGTACACCAGCTTGCAGAGGTTCAATTTAC AGAGCCCTAGGGCTCATGGTTGCAGCATCACCGTGTGCCTTGGCTGTGGCCCCATTGGCTTATGCTACAGCAATAAGCTC CTGTGCAAAAAAGGGGATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTCATACTATTGCATTTGACA AAACCGGGACATTGACAACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTATGGTCATCACATTATAAACAAGGAA GCGAACATATCTTCCTGTTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGCACTAC CCACCCAATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAATACT TTCCTGGTAGAGGCCTGACTGCTACTGTTAACAGCATTGAGGTAACATTGATTCATCTAGAGGACAGGCCTCGTCCAGGG GTTTTTAATGTTATTCAGGAGTTGCAAGATGAAGCAAAGCTTCGTGTGATGATGTTGACTGGTGATCATGAATCTAGTGC AAAGAGAGTTGCAAGTGCCGTGGGCATCAATGTGTTTCATTGCAATCTGAAGCCCGAAGATAAGCTGAGTCATGTAAAGG ATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCCCCAGCACTTGCTGCTGCAACT GTTGGAATTGTTCTTGCACAACGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTATTGTTACTTCGAGAAAATATTTC TGCAGTGCCTTTTTGTATTGCCAAGTCTCGTCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCGTTGACCTCTA TTATCATGGCTTCTCTTCCGTCAGTTTTAGGATTTGTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTG CTTGTTTGTCTCAATTCAATACGTGCTTTAAATGAACCATCTTGGTCCTGGAAGCAGGATGTATTAAATTTGATTACCGA GGTTAAATCTAAACTCCTATCTCTGAGGACAAATATCACTGGCCCAAGCAGCATCACAACGGCAAAATTGTGA
Protein sequence (LotjaGi4g1v0100100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAVSYSIPSSTKFQSLHIYTKPTRSKLTLRPHQISIKPFYSSKFLILHHHRLRCVAAESTSNHHHNHNHHDHHHDHEHH HNHHHHHHHHSHGTDDANLTGPQKAIIGFAKATRWMDLANVLREHLHLCCISAALFVAAAICPHTLPKPLIKPLQNTLIF MAFPLVGVSASLDALIEISSGKVTIHVLMAMAAFASIFMGNAVEGGLLLAMFNLAHIAEEYFTGRSMVDVKELKENYPDF VLVLDTKDDKLPNTVDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGGATITIEHLTGEVKPLEAKVGDRIPGGARN LDGRIIVKVMKTWKESTLSRIVQLTEEAQLNRPNLQRWLDKFGERYSRVVVVLSIAVAVIGPLVFKWPFFSTPACRGSIY RALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPIYGHHIINKE ANISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLTATVNSIEVTLIHLEDRPRPG VFNVIQELQDEAKLRVMMLTGDHESSAKRVASAVGINVFHCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAAT VGIVLAQRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTSIIMASLPSVLGFVPLWLTVLLHEGGTL LVCLNSIRALNEPSWSWKQDVLNLITEVKSKLLSLRTNITGPSSITTAKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 125 | 125 | - | – | |
| PANTHER | 31 | 546 | 516 | 0.0 | – | |
| PANTHER | 31 | 546 | 516 | 0.0 | – | |
| MobiDBLite | 60 | 97 | 38 | - | – | |
| MobiDBLite | 67 | 91 | 25 | - | – | |
| PRINTS | 95 | 109 | 15 | 9.8E-13 | – | |
| TMHMM | 125 | 147 | 23 | - | – | |
| Phobius | 126 | 146 | 21 | - | – | |
| CDD | 127 | 728 | 602 | 0.0 | – | |
| Phobius | 147 | 157 | 11 | - | – | |
| TMHMM | 157 | 176 | 20 | - | – | |
| Phobius | 158 | 176 | 19 | - | – | |
| Phobius | 177 | 182 | 6 | - | – | |
| Phobius | 183 | 200 | 18 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| SUPERFAMILY | 187 | 710 | 524 | 1.2E-11 | ||
| Phobius | 201 | 205 | 5 | - | – | |
| Phobius | 206 | 224 | 19 | - | – | |
| Phobius | 225 | 365 | 141 | - | – | |
| Gene3D | 227 | 349 | 123 | 2.4E-22 | – | |
| Pfam | 258 | 431 | 174 | 1.4E-45 | – | |
| SUPERFAMILY | 259 | 344 | 86 | 3.14E-15 | ||
| TIGRFAM | 259 | 707 | 449 | 6.9E-66 | ||
| Phobius | 366 | 387 | 22 | - | – | |
| TMHMM | 369 | 391 | 23 | - | – | |
| Phobius | 388 | 398 | 11 | - | – | |
| Phobius | 399 | 421 | 23 | - | – | |
| TMHMM | 403 | 425 | 23 | - | – | |
| Phobius | 422 | 686 | 265 | - | – | |
| Gene3D | 432 | 461 | 30 | 7.4E-21 | ||
| SUPERFAMILY | 449 | 726 | 278 | 2.47E-38 | ||
| Pfam | 449 | 541 | 93 | 7.4E-9 | – | |
| ProSitePatterns | 453 | 459 | 7 | - | ||
| Gene3D | 462 | 542 | 81 | 7.4E-21 | ||
| Gene3D | 545 | 694 | 150 | 7.0E-38 | ||
| PANTHER | 546 | 765 | 220 | 0.0 | – | |
| PANTHER | 546 | 765 | 220 | 0.0 | – | |
| Pfam | 549 | 639 | 91 | 3.3E-12 | – | |
| PRINTS | 549 | 560 | 12 | 9.8E-13 | – | |
| PRINTS | 572 | 582 | 11 | 9.8E-13 | – | |
| PRINTS | 626 | 645 | 20 | 9.8E-13 | – | |
| PRINTS | 650 | 662 | 13 | 9.8E-13 | – | |
| Phobius | 687 | 710 | 24 | - | – | |
| Phobius | 711 | 770 | 60 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0100100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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