Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd02854

Source: CDD

Description

E_set_GBE_euk_N

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0276889.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform X1 [Cicer arietinum] gi\|502131109\|ref\|XP_004500878.1\|	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR006407 IPR013780 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02806 PF02922 PIRSF000463 PTHR10357 PTHR10357:SF110 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	25
Lj1g3v2294860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Glycine max] gi\|356508675\|ref\|XP_003523080.1\|	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR006407 IPR013780 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02806 PF02922 PIRSF000463 PTHR10357 PTHR10357:SF110 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	25
Lj1g3v4699750.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch branching enzyme I [Pisum sativum] gi\|1345570\|emb\|CAA56319.1\|	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR006407 IPR013780 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02806 PF02922 PIRSF000463 PTHR10357 PTHR10357:SF141 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	25
LotjaGi1g1v0436100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp\|Q41059\|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|K7KHN1\|K7KHN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436100	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 IPR037439 PF00128 PF02806 PF02922 PIRSF000463 PTHR43651 PTHR43651:SF2 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	23
LotjaGi1g1v0436100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp\|Q41059\|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|X5CRZ1\|X5CRZ1_LENCU Starch branching protein I; Found in the gene: LotjaGi1g1v0436100	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 IPR037439 PF00128 PF02806 PF02922 PIRSF000463 PTHR43651 PTHR43651:SF2 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	23
LotjaGi1g1v0678900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp\|Q41058\|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A0A072U332\|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 IPR037439 PF00128 PF02806 PF02922 PIRSF000463 PTHR43651 PTHR43651:SF9 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	23
LotjaGi1g1v0678900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp\|Q41058\|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A0A072U332\|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 IPR037439 PF00128 PF02806 PF02922 PIRSF000463 PTHR43651 PTHR43651:SF9 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	23
LotjaGi1g1v0678900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp\|Q41058\|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|X5CLX6\|X5CLX6_LENCU Starch branching protein II; Found in the gene: LotjaGi1g1v0678900	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 IPR037439 PF00128 PF02806 PF02922 PIRSF000463 PTHR43651 PTHR43651:SF9 SM00642 SSF51011 SSF51445 SSF81296 cd02854 cd11321	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd11321	CDD	1	12.50