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PF00128

Source: Pfam

Description

Alpha amylase, catalytic domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

Associated Lotus transcripts 41

Transcript Name Description Predicted domains Domain count
Lj0g3v0276889.1
– PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform X1 [Cicer arietinum] gi|502131109|ref|XP_004500878.1|
Domains
25
Lj0g3v0304069.1
– PREDICTED: isoamylase 2, chloroplastic-like [Cicer arietinum] gi|502109456|ref|XP_004493650.1|
Domains
21
Lj1g3v1525840.1
– PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] gi|356508064|ref|XP_003522781.1|
Domains
21
Lj1g3v2294860.1
– PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Glycine max] gi|356508675|ref|XP_003523080.1|
Domains
25
Lj1g3v3021200.1
– PREDICTED: rootletin-like isoform X1 [Cicer arietinum] gi|502091304|ref|XP_004489508.1|
Domains
19
Lj1g3v4699750.1
– Starch branching enzyme I [Pisum sativum] gi|1345570|emb|CAA56319.1|
Domains
25
Lj2g3v1338900.1
– PREDICTED: alpha-amylase 3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502093621|ref|XP_004489999.1|
Domains
18
Lj4g3v3015110.2
– Isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] gi|139867053|dbj|BAF52941.1|
Domains
18
Lj4g3v3015110.3
– Isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] gi|139867053|dbj|BAF52941.1|
Domains
11
Lj5g3v0255820.1
– PREDICTED: probable alpha-amylase 2-like isoform X1 [Cicer arietinum] gi|502126458|ref|XP_004499314.1|
Domains
12
Lj5g3v0255820.2
– PREDICTED: probable alpha-amylase 2-like isoform X1 [Cicer arietinum] gi|502126458|ref|XP_004499314.1|
Domains
12
Lj5g3v0290420.1
– Alpha-amylase [Medicago truncatula] gi|357437821|ref|XP_003589186.1|
Domains
27
LotjaGi1g1v0340200.1
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KJ81|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200
Domains
19
LotjaGi1g1v0340200.2
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KU93|K7KU93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200
Domains
21
LotjaGi1g1v0340200.3
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KJ81|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200
Domains
19
LotjaGi1g1v0436100.1
– 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7KHN1|K7KHN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436100
Domains
23
LotjaGi1g1v0436100.2
– 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CRZ1|X5CRZ1_LENCU Starch branching protein I; Found in the gene: LotjaGi1g1v0436100
Domains
23
LotjaGi1g1v0512100.1
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0L9THE5|A0A0L9THE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0512100
Domains
17
LotjaGi1g1v0512100.2
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|V7B3M4|V7B3M4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0512100
Domains
15
LotjaGi1g1v0512100.3
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0S3RRX1|A0A0S3RRX1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0512100
Domains
17
LotjaGi1g1v0512100.4
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0L9THE5|A0A0L9THE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0512100
Domains
17
LotjaGi1g1v0678900.1
– 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900
Domains
23
LotjaGi1g1v0678900.2
– 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900
Domains
23
LotjaGi1g1v0678900.3
– 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CLX6|X5CLX6_LENCU Starch branching protein II; Found in the gene: LotjaGi1g1v0678900
Domains
23
LotjaGi1g1v0729900.1
– Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr|K7MYJ2|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900
Domains
19
LotjaGi1g1v0729900.5
– Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr|K7MYJ2|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900
Domains
19
LotjaGi2g1v0308200.1
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0KR39|A0A0R0KR39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0308200
Domains
18
LotjaGi2g1v0308200.2
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0B2PHN3|A0A0B2PHN3_GLYSO Alpha-amylase; Found in the gene: LotjaGi2g1v0308200
Domains
18
LotjaGi2g1v0308200.3
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A1J7GNN0|A0A1J7GNN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0308200
Domains
16
LotjaGi2g1v0308200.4
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0KR39|A0A0R0KR39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0308200
Domains
18
LotjaGi4g1v0185700.1
– Alpha-amylase; TAIR: AT1G69830.1 alpha-amylase-like 3; Swiss-Prot: sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic; TrEMBL-Plants: tr|I1KXQ4|I1KXQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0185700
Domains
15
LotjaGi4g1v0440200.1
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr|A0A151TKF6|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200
Domains
19
LotjaGi4g1v0440200.2
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr|A0A151TKF6|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200
Domains
16
LotjaGi4g1v0440200.3
– 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr|A0A151TKF6|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200
Domains
18
LotjaGi5g1v0002500.1
– Alpha-amylase; TAIR: AT1G76130.1 alpha-amylase-like 2; Swiss-Prot: sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2; TrEMBL-Plants: tr|C6TCX9|C6TCX9_SOYBN Alpha-amylase; Found in the gene: LotjaGi5g1v0002500
Domains
20
LotjaGi5g1v0002500.2
– Alpha-amylase; TAIR: AT1G76130.1 alpha-amylase-like 2; Swiss-Prot: sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2; TrEMBL-Plants: tr|C6TCX9|C6TCX9_SOYBN Alpha-amylase; Found in the gene: LotjaGi5g1v0002500
Domains
20
LotjaGi5g1v0002500.3
– Alpha-amylase; TAIR: AT1G76130.1 alpha-amylase-like 2; Swiss-Prot: sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2; TrEMBL-Plants: tr|C6TCX9|C6TCX9_SOYBN Alpha-amylase; Found in the gene: LotjaGi5g1v0002500
Domains
20
LotjaGi5g1v0028300.2
– Alpha-amylase; TAIR: AT4G25000.1 alpha-amylase-like protein; Swiss-Prot: sp|P17859|AMYA_VIGMU Alpha-amylase; TrEMBL-Plants: tr|A0A151S840|A0A151S840_CAJCA Alpha-amylase; Found in the gene: LotjaGi5g1v0028300
Domains
25
LotjaGi5g1v0028400.1
– Alpha-amylase; TAIR: AT4G25000.1 alpha-amylase-like protein; Swiss-Prot: sp|P17859|AMYA_VIGMU Alpha-amylase; TrEMBL-Plants: tr|A0A151S7Y0|A0A151S7Y0_CAJCA Alpha-amylase; Found in the gene: LotjaGi5g1v0028400
Domains
16
LotjaGi5g1v0028400.2
– Alpha-amylase; TAIR: AT4G25000.1 alpha-amylase-like protein; Swiss-Prot: sp|P17859|AMYA_VIGMU Alpha-amylase; TrEMBL-Plants: tr|A0A151S7Y0|A0A151S7Y0_CAJCA Alpha-amylase; Found in the gene: LotjaGi5g1v0028400
Domains
25
LotjaGi6g1v0156000.3
– 1,4-alpha-glucan branching enzyme, putative; TAIR: AT3G20440.2 Alpha amylase family protein; Swiss-Prot: sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7MQT1|K7MQT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0156000
Domains
23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.44