Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Alpha amylase, C-terminal all-beta domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform X1 [Cicer arietinum] gi|502131109|ref|XP_004500878.1| | 25 | ||
| – | PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Glycine max] gi|356569752|ref|XP_003553060.1| | 12 | ||
| – | PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Glycine max] gi|356508675|ref|XP_003523080.1| | 25 | ||
| – | Starch branching enzyme I [Pisum sativum] gi|1345570|emb|CAA56319.1| | 25 | ||
| – | 1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr|K7KU93|K7KU93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200 | 21 | ||
| – | 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7KHN1|K7KHN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436100 | 23 | ||
| – | 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41059|GLGB2_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CRZ1|X5CRZ1_LENCU Starch branching protein I; Found in the gene: LotjaGi1g1v0436100 | 23 | ||
| – | 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900 | 23 | ||
| – | 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A072U332|A0A072U332_MEDTR Starch branching enzyme I; Found in the gene: LotjaGi1g1v0678900 | 23 | ||
| – | 1,4-alpha-glucan-branching enzyme; TAIR: AT5G03650.1 starch branching enzyme 2.2; Swiss-Prot: sp|Q41058|GLGB1_PEA 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CLX6|X5CLX6_LENCU Starch branching protein II; Found in the gene: LotjaGi1g1v0678900 | 23 | ||
| – | 1,4-alpha-glucan branching enzyme, putative; TAIR: AT3G20440.2 Alpha amylase family protein; Swiss-Prot: sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7MQT1|K7MQT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0156000 | 23 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 9.09 |