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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0280900 |
| Transcript ID | LotjaGi5g1v0280900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein disulfide isomerase-like protein, putative; TAIR: AT1G35620.1 PDI-like 5-2; Swiss-Prot: sp|Q94F09|PDI52_ARATH Protein disulfide-isomerase 5-2; TrEMBL-Plants: tr|A0A072VPJ1|A0A072VPJ1_MEDTR Protein disulfide isomerase-like protein, putative; Found in the gene: LotjaGi5g1v0280900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59640602..59647632) extracted from Lotus japonicus Gifu genome v1.2.
TTCGAATGCTACCTGCAGGCAGGATGCTGGCCCACCTGGACCCAACAACTTCCACCGAAAAACTAAACAAAGAACAACAA CAACAGCAACAAGTTTGTGTTTCTGGATCGAAGAAGATGAGGGTTTTGTTGGCTTCTTGTGTTGCGTTGTTGATCCACTT TTGCAGTGCTTCTGAACCACTCTCGGTGGATGGCACGGTGTTGGTACTCGACGAATCCAACTTCGATTCCGCTATCTCCT CCTTCGATCACATCTTGGTTGACTTTTACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGGTACCACCATCT TCTCTTCCATTCCTCTCGTCTAATGATTGTGCTGTTTTTCAACTTTCCATTTTTGTCCCAAACCCACTTGCAAAATTCCC CCTTTATTGTTCATATTTGCTTTTGGTTGGTTCCTGAATGTGAGGTCCAATTTTTAGAAACTGGGTATTCATGGTTTGTT TTTGGGTATGTAAGCATGTCTTGATAATAGTGGATATGATTGGTGCCCTTTTGGAATTGTTATGTGCATGATCATCAAGG ATAATGCATATTTTCAATGGCTTGGATTATGGTTTATGAGTATTAGTTGTTAATGTTACATCACTGATTGTTCTTATTAA TTTTTAACTTCATAAAATGTTTCTGAGATATAAATAGACTTGTTAGTTACCCAAGACGGGTAGCTTAGTTGGCAACGCAG GCTGAGTGTGTGGGAAGAGCTCTCGGGTCCGATCCCCACACAATACACTCTAGGAGAGGGATGAGGAGCCTTAATTGTGA CTAAATCCTGAATCTGGCGGCATCCAAAGGGTGACCGGGTACCGGATGTTAATACTAAAAACAAAATAGGCTTGTTAGTT TTAATGGTACATTGCCATTGGTATTTAGTTTTTTTTTATTTGATATTCTTGAGTGTCATTTATGTTTCATTTAATGTGAG GATAAAAAATGTGATTTTCTACCTCTCAGTTAGATGCAGCTGCCCCTGTACTTGCAGCCTTGAAGGATCCCATAGTCATA GCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCTAAAAAACATGATGTCGAGTATGTTTCTTTGGCTCTGTTTAGTCA TATCGTACCCAAACATTATGCACCTATAACTGGAAATGAACTTATGCTAAACTTCTATTTTGTGATGCAGTGCGTATCCA ACCATTCTTCTGTTTAATCACGGTGTACCCACAGAATACCGTGGACCAAGGAAAGCAGATGTACTTGTTCGTTATCTAAA GAAATTTGCTGCTTCTGATGTTTCCGTTCTTGATTCAGATTCTGCTGTGAACAATTTTGTTGAAGAAGCTGGCACTTTTT TCCCATTATATATAGGTTTTGGGCTGAATGAGTCGGTAATAGAAAAGTTAGCCATAAAGTATAAGAAAAATGCATGGTTT TCTGTGGCTAAGGATTTCTCAGAGGATCTTATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCTCTTAATCC ACAGTTCAATGAGCGGAGCACATTCTATGGCCCCTATGAAGGTTAGTTATATCGTACATAATCAAAGACACTTAGTATTT CATTTACTTACAAGTTATTCCTTCTCATTTAAACTAGAAGTCTTGAAGACATTGTTAATTGTATTTTAAGATAGTGTTTA AGCTTTGGAGAAGTCCTTTTTCTACTTTTTGGTTTGTCTGGATATTTTTGTAGCATCAGTACTCACTATCCTGGTTTTAC GAGTAATATAAAATTGAAAGGCTCTATGGAACTAAACTCTGTTTTTAAATGTTTGATGCCTTTATGTTGACTGAATTGTA GTAGAACTCGTAGCCACAACTTGTGTCTTTGCAACTTTTATGGGATAGTGTAACTTTTATAGCTTCTCTATGTATTTATG CTATTGGTTTCTTTGGCCTAGATCAAATTATCTTATAAATTAAACAGGATTTGACAAAATTAACTATGGAACTTAACTGA AGCTGCAATCTAACCTTAAACATATAATATAATAGGTTCATCCGGAAGGCCTTTCTTGTTTCAGGGTAGGAGCTAACGTA GGTTTTAGAACTTGAATACTATGATGATGGTTTTCTTACTTCTAAAAAAGACCGGAGCTTGAATGTCTATTATTAGGGCT TGTTTGGGTAAACAACAAACTTTAGCACGCATCACATGACTTTCATTAGCTTCTGCAACTTCCACATAAGCTATACGTTT TTTCAACTTCCCCACAAGTTGATTTTCATAAGCTTATTTGAGAAGTTTATTGAAATAACCTCAAAAGAACTTATTGGTAG GTCTTAAGTTATTTTTATAAACATAAACAAACACTTGCTTAAATAATTATGTCATGAGATTCGCCCAAATAAGCTCTAGA AAAGCTCGTTTTCTTTCTTCATCAGAAGTTATTATTATGTTGTGATCTTATCAGTGCTTCTTGAATTATGTATATATATT TTGCCCTTTACATTTTGTTATTTTGGAATATATTCACTTTTCTTCATATGCTACTTCATTGTTTTAACTTTAACACATCA TTACAGGAACCTTTTGATGAGTTATTTTTGTTTTCATAAAGCAGAGAACTTTTTGGAAGATTTTGTAAAACAAAACCTGA TTCCTTTGGTCGTGCCAGTTTCCTATGACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTTTTGACAATTGTG GAGGATGAAAATGAAGAAAATTCAAAGGAACTGATTAAGTTATTGAAGGGTGCTGCATCTGCAAATCGTGACTTAATATT TGGTTATGTTGGAGTTAAACAGATGGACGAATTCGCTGACAAATTTGATACCAGTACTAAACTACCAAAGATGGTCATTT GGGATAAAAGTGATGACTACCTTTCTGTAAGTTAATGGTCTACTAGAGTTTTTTATTTTTATTTTAGTTTGTCCCAATCG TACTTCTCTAAGTGATATGTGGTCTCTATTTGTCTTGCATACATGCCTAGGTTCAAAGTTCTTCTTCCCCCTTATTCTAG TACTCCATTTTGCATGTCTTATTCTTGTCAATTTTGATCTATATGTATATTCTTGTGTATTTTTTAGATGAGTTATGGAG AAGAAGAAAAATCTTATATTCATTCATGTCATGTAAATAGTTTTCTTTGATTATATATACAGTGTTAGAAATACAATATA AAACAATTCATGTGTTTTCGCTAAAAGCTCAAGTTTTTGGTATAGTTAGTTCATGACATAATATCAGAGCCTTTATGGTC AAATGGTCTTGGTTTAATCCTTGTTTAGCCTATTGTTCGGATAAAAATTTGAATTTCATCTCAATTTTGGTGGATCTGTG TATTGTCCACACTTCAAGCCCAATTGTTTCTTGTATGAAGGGGCATGTTAGTTGATTCATGACACACAAGTACCCCAACA TTCTAGAGTGATGTAGAGAATTGAGATAATCATATTAAATATGTGGAATTTAAGATCCCTATGATTGTGTGGAAATTAAA ATGCTGTTCAGTTCATAACTAGGAATCTCAAGAATGTGATTTTGGGTCTCCAGATATCACACACTCCCATAACACAAGCC CAGTGGGTTCCAAAATTTGGCATTAAAAATGCAGGGTATCTTATTGGTGAGGATATGTGAGCTTACTAAATGCTTCAAAT CTTCAATAATGTTTACTGCTATAAATTTGTGATAGGTACTCACATATTTATAGGTACTTTTGGTTAGTATTGTCTTAGTT AGTTGGGAGGGTTAGTTAGTTAGAGGATTGAAGAGCTTGGTTTCCTATAAATAAGAGGAAGTTAGAGTCAGTTGGGTATC TTTGTATTCAGTTTGGTTTTGGGTTCTAGAGAGAGTGGTCTCTTTCTGGGTGTGAAGGGTATTTGGTATCCCTTCTCTAT TGTATCTTTCGGTCTTTCCTTAGTTTTCAATTTGGGGATTAGGAATTTCTATCAATAAAATCAGGTTCTACCAATCTGCA TATCCTTTGATTCACAATTCATCATCAGTTACATTATTGCTTCGTGAGACTTGACGTGGAAGCCATGTCACTAGTCTATT TAGGCTCTAAATTTGAGGTCTATATAATGTTTACTCCTATCAATCTTGTTATTATATACATAATCGTCATAGTACCATAT CCTATTTGGTACAAGTGATTGCTAGAAAATTTGTTCAAACGATCTGAACCTTCACTCCTCTTGATATCCCTTCTTGTCAA GGCCTTTGTCTATATCTTAAGGAAACGTGTATACTCTATTTTATTTCATTTAGGGCTTTTATCGAATTTTAATGTACAAG CCTTCATTGTTATATCCAAGTCACTTCCGACTCTGATGCAATGTGCTTTTCTGTTGTGAAGGATTAAAATTAAAATGAAT TTATCCACAATTGTCAATGTCATAGTTTCTTTGGAACTTTCAGATTTATCCTTTTAACCTGTTAGTTAATGCAATTGAGT AGTTTATTTCTACAGTGTTGAGTTTGCTATCTTAGTAAGTTCTTTACAAGGAGTCATATTAACTTAAATCTGCTGATACC ATATTGGGAAGCTAATCCCAACTTTTTTGAAATAATTTTCAGGTTGTTGGTTCAGAAAGCATTGAAGGAGAGGATCAGGG AACTCAAATCACTAAATTTCTAGAAGGATATAGAGAAGGAAGAACTGTACAGAAAAGACTTAGTGGGCCTTCACTGATGC AATTTATCCATCGATCTTTTGACATTAGAATGGTGTACATGATTGTATTTATGGTCGCAGTATTCATACTTATTCAGACC CTTGGCGGTAAAGGAGGTGATGAACACCATAGAGTACCAAATCAAGAACAGGTAGATCATGCAAGCAGCTCTGTTTCAGA AGTTGAAAGCAAAGAAGAGTATAAACCAGGAGACAAAAAGGAAGATTAAATTTAACACATGCAATCATCATCACTGAACG TGATCAGGGATACTCTAAAGAGCACCTTACCTATTGGTATGTGTAAATATTTAGAGTTTGCGTATTTCCTTAATTTTGAC TTTTGAGTACTGTCTAAACTCTACGTTTTTCTACATTTTCATTTCTTAACATGAAAAGGCTTATTTATTGTTTCCAACAG GGAGATGATAAAATTGTTGACTTTATTATGATTTACTTACATCCTTCCTATATATATTTTAACTTATTAGTATGGATAGG TCGTGCCCCTTGCTGCTGAACAAGAGCAATATAAATTGTCAGAGAATTTCCAAATTATAAGTAATTTTTTTTTCATCTTT TACACATTGGGATGTTTGGTTCAGATAGTCGTCACTAGCACATTTTGAGGTAATTGTTTCAAAAGTTAGTAATAGATCTG TTATTAGGACCAAGTGGCTCAAGGGTGATATCACAGTACAAATTAATCAGAACCTGACATGTTGGACAAGGCTTAAAAGC TTGAGAGGATGAGCAAAATCAGACTTGCATGGTTAATGGTAAAACAATGAGTCCCGATGATATGCCTATTGAAGTTTGGA AATGTGTAGAAGATCAAGGTGTTGATTGGCTCACTAAGTTGTTCAGTAAAATTTTGAGATCTAAACAAATGCCAAATGTG TGGAGAGCTGATGTAGGAAATAATCTGTAAGTAGAAATTGGTTTCGATATCATACCTCAAGACTCAAGTTTCACAGGTTA GGTACCTTGATCGATTATACAAAACATTGGGAAATTGACAAAGATATTACACATGGAATTCACACTGAGTGGTTACAGTG TAGAAAAGCTTTAGGAGTTATCTGTGACTACAAAGTACTTATCTAAGGTCAAACGAAAGTTTTACCGAATGTTATAAGGT CTGCTATTCTCTATGATATCCAATGTTGAGCTTTAACGAGACATGAGAAAACTATTGTATTACTGAAGGTTATTTGATCA GCTAATCTATATGATAGCGAATATTGGACTTTAACGGACATGAGAAAATTGTTGGAGTAGCAGAGGTGAGAATGTTGGAT GAATTAGTAGTCATACTAGAAATGATAAGATTCACAGTGAAACATAAACATGTACAAAGAAGAGGGAGGTAAAAAAGAAT GAGAGATTATTGTTAATAGTGATGTTATTATCATTAATGTCTCTAAAAATCTAGTTTTTGATTGAGCTTAATGTCGTAAT TGATTTATATAGTCGATTTTACTTTGTGGGATAAGAGTATAAGACTTTTGTTTTTGTTGAGAATCCTTAAGTGCCTTTAA ATATCTAAGAACTTTGATTGCATTTGACTAGAGAATAATATCTTTCTTCCCCTTTTCTCAAGTTTATTGACATTTAAATA TAATATATGACATGGTTATCCATATGTTCTGAAAAACGTGGGCTTTCTTTTATGTAAGGTTATAATCGTTCAACACACAT CATTTCTAATAGTCTTTGATTCAACCATATCTAAGTAGATCTACTAGGTGACTTCAAGATTATCATTATTATTCAGCTAG TGATTCATAACTCATGATAAATTGTTAACAGAGTTGAGCTCACCTTGATTTGGATAAGGCTTTGCAATCTTCATTCTTTA TCATTTTTTTGAATTCCTTTGACTTTTAGAATCTGTCCTGGTCATCATCCTTCCATAAAATAAATTTGCACGAGCTTGAC GAGTTGCTTTGTTAAAATGAAAAAAAAAACTCTCATATAAGCCTCATACTCTTTTTTGTAATATCCTAGTAATTCCTAAA CGTCTTGACACTTGGTGAGCTAAGGGAATGAAGAGATTTGCAGGATGAAGGGTCAGGATTCGAATCCTGACGAAAGAACT AATTTACTAACAATTAACAACTAACATTTGCCTATAAAAAAAAAACTTACTAATAAACATTGAACCAAGTTATTCGTACT GCTACTTTTACAAATAATAAAAATTCAAAGCCAAGGGAAAACCTTGCTCGCCCACAGAATTTTCCTCAAAATAAAAAAAA AACGACAATATTGGGGGACACAGGTATTTAATTTAGAGATGTGATGGGTGTACCGGTTCCGACAAAGCAAC
CDS sequence (LotjaGi5g1v0280900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTACCTGCAGGCAGGATGCTGGCCCACCTGGACCCAACAACTTCCACCGAAAAACTAAACAAAGAACAACAACAACA GCAACAAGTTTGTGTTTCTGGATCGAAGAAGATGAGGGTTTTGTTGGCTTCTTGTGTTGCGTTGTTGATCCACTTTTGCA GTGCTTCTGAACCACTCTCGGTGGATGGCACGGTGTTGGTACTCGACGAATCCAACTTCGATTCCGCTATCTCCTCCTTC GATCACATCTTGGTTGACTTTTACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCCCC TGTACTTGCAGCCTTGAAGGATCCCATAGTCATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCTAAAAAACATG ATGTCGATGCGTATCCAACCATTCTTCTGTTTAATCACGGTGTACCCACAGAATACCGTGGACCAAGGAAAGCAGATGTA CTTGTTCGTTATCTAAAGAAATTTGCTGCTTCTGATGTTTCCGTTCTTGATTCAGATTCTGCTGTGAACAATTTTGTTGA AGAAGCTGGCACTTTTTTCCCATTATATATAGGTTTTGGGCTGAATGAGTCGGTAATAGAAAAGTTAGCCATAAAGTATA AGAAAAATGCATGGTTTTCTGTGGCTAAGGATTTCTCAGAGGATCTTATGGTATTGTATGACTTTGATAAGATTCCTGCA TTGGTTTCTCTTAATCCACAGTTCAATGAGCGGAGCACATTCTATGGCCCCTATGAAGAGAACTTTTTGGAAGATTTTGT AAAACAAAACCTGATTCCTTTGGTCGTGCCAGTTTCCTATGACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAG TTTTGACAATTGTGGAGGATGAAAATGAAGAAAATTCAAAGGAACTGATTAAGTTATTGAAGGGTGCTGCATCTGCAAAT CGTGACTTAATATTTGGTTATGTTGGAGTTAAACAGATGGACGAATTCGCTGACAAATTTGATACCAGTACTAAACTACC AAAGATGGTCATTTGGGATAAAAGTGATGACTACCTTTCTGTTGTTGGTTCAGAAAGCATTGAAGGAGAGGATCAGGGAA CTCAAATCACTAAATTTCTAGAAGGATATAGAGAAGGAAGAACTGTACAGAAAAGACTTAGTGGGCCTTCACTGATGCAA TTTATCCATCGATCTTTTGACATTAGAATGGTGTACATGATTGTATTTATGGTCGCAGTATTCATACTTATTCAGACCCT TGGCGGTAAAGGAGGTGATGAACACCATAGAGTACCAAATCAAGAACAGGTAGATCATGCAAGCAGCTCTGTTTCAGAAG TTGAAAGCAAAGAAGAGTATAAACCAGGAGACAAAAAGGAAGATTAA
Protein sequence (LotjaGi5g1v0280900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPAGRMLAHLDPTTSTEKLNKEQQQQQQVCVSGSKKMRVLLASCVALLIHFCSASEPLSVDGTVLVLDESNFDSAISSF DHILVDFYAPWCGHCKRLSPELDAAAPVLAALKDPIVIAKVDADKHTRLAKKHDVDAYPTILLFNHGVPTEYRGPRKADV LVRYLKKFAASDVSVLDSDSAVNNFVEEAGTFFPLYIGFGLNESVIEKLAIKYKKNAWFSVAKDFSEDLMVLYDFDKIPA LVSLNPQFNERSTFYGPYEENFLEDFVKQNLIPLVVPVSYDTLKLMKADGRKIVLTIVEDENEENSKELIKLLKGAASAN RDLIFGYVGVKQMDEFADKFDTSTKLPKMVIWDKSDDYLSVVGSESIEGEDQGTQITKFLEGYREGRTVQKRLSGPSLMQ FIHRSFDIRMVYMIVFMVAVFILIQTLGGKGGDEHHRVPNQEQVDHASSSVSEVESKEEYKPGDKKED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 409 | 409 | - | – | |
| PANTHER | 40 | 466 | 427 | 1.2E-203 | – | |
| PANTHER | 40 | 466 | 427 | 1.2E-203 | – | |
| ProSiteProfiles | 46 | 170 | 125 | 14.256 | ||
| Gene3D | 55 | 177 | 123 | 2.9E-34 | ||
| SUPERFAMILY | 58 | 168 | 111 | 4.73E-32 | ||
| Pfam | 65 | 167 | 103 | 3.8E-27 | ||
| CDD | 66 | 165 | 100 | 4.95761E-34 | – | |
| PRINTS | 83 | 91 | 9 | 8.7E-7 | – | |
| ProSitePatterns | 84 | 102 | 19 | - | ||
| PRINTS | 91 | 100 | 10 | 8.7E-7 | – | |
| PRINTS | 134 | 145 | 12 | 8.7E-7 | – | |
| SUPERFAMILY | 204 | 281 | 78 | 3.88E-5 | ||
| Pfam | 210 | 364 | 155 | 5.3E-11 | – | |
| Gene3D | 260 | 397 | 138 | 1.7E-11 | ||
| SUPERFAMILY | 270 | 396 | 127 | 6.56E-6 | ||
| TMHMM | 408 | 427 | 20 | - | – | |
| Phobius | 410 | 428 | 19 | - | – | |
| Phobius | 429 | 468 | 40 | - | – | |
| MobiDBLite | 432 | 468 | 37 | - | – | |
| MobiDBLite | 451 | 468 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi5g1v0280900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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