Domain Predictions — View

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cd06008

Source: CDD

Description

NF-X1-zinc-finger

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0101599.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Glycine max] gi\|356527906\|ref\|XP_003532547.1\|	Domains IPR000967 IPR001841 IPR019786 IPR019787 IPR034078 PF01422 PS01359 PS50016 PS50089 PTHR12360 PTHR12360:SF0 SM00438 SSF57850 cd06008	14
Lj2g3v0658160.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] gi\|502163239\|ref\|XP_004512772.1\|	Domains Coil G3DSA:3.30.70.330 IPR000967 IPR001841 IPR012677 IPR019786 IPR019787 IPR034078 PF01422 PS01359 PS50016 PS50089 PTHR12360 PTHR12360:SF0 SM00438 SSF57850 cd06008 mobidb-lite	18
Lj6g3v0521560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Cicer arietinum] gi\|502129986\|ref\|XP_004500492.1\|	Domains CYTOPLASMIC_DOMAIN IPR000967 IPR001841 IPR019786 IPR034078 NON_CYTOPLASMIC_DOMAIN PF01422 PS01359 PS50089 PTHR12360 SM00438 SSF57850 TMhelix TRANSMEMBRANE cd06008 mobidb-lite	16
Lj6g3v0521560.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Cicer arietinum] gi\|502129986\|ref\|XP_004500492.1\|	Domains CYTOPLASMIC_DOMAIN Coil IPR000967 IPR034078 NON_CYTOPLASMIC_DOMAIN PTHR12360 PTHR12360:SF1 SM00438 TMhelix TRANSMEMBRANE cd06008 mobidb-lite	12
LotjaGi2g1v0192800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NF-X1-type zinc finger protein NFXL1; TAIR: AT1G10170.2 NF-X-like 1; Swiss-Prot: sp\|Q9SY59\|NFXL1_ARATH NF-X1-type zinc finger protein NFXL1; TrEMBL-Plants: tr\|A0A1J7GX75\|A0A1J7GX75_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0192800	Domains Coil IPR000967 IPR001841 IPR019786 IPR019787 IPR034078 PF01422 PS01359 PS50016 PS50089 PTHR12360 PTHR12360:SF13 SM00438 SSF57850 cd06008 cd16696 mobidb-lite	17
LotjaGi4g1v0465300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NF-X1-type zinc finger protein NFXL1; TAIR: AT1G10170.1 NF-X-like 1; Swiss-Prot: sp\|Q9SY59\|NFXL1_ARATH NF-X1-type zinc finger protein NFXL1; TrEMBL-Plants: tr\|A0A1J7GX75\|A0A1J7GX75_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0465300	Domains IPR000967 IPR001841 IPR019786 IPR019787 IPR034078 PF01422 PS01359 PS50016 PS50089 PTHR12360 PTHR12360:SF13 SM00438 SSF57850 cd06008 cd16696	15
LotjaGi6g1v0075600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NF-X1-type zinc finger protein NFXL2; TAIR: AT5G05660.1 NF-X1-type zinc finger protein NFXL2; Swiss-Prot: sp\|Q9FFK8\|NFXL2_ARATH NF-X1-type zinc finger protein NFXL2; TrEMBL-Plants: tr\|G7JBA9\|G7JBA9_MEDTR NF-X1-type zinc finger protein NFXL2; Found in the gene: LotjaGi6g1v0075600	Domains CYTOPLASMIC_DOMAIN IPR000967 IPR001841 IPR019786 IPR034078 NON_CYTOPLASMIC_DOMAIN PF01422 PS01359 PS50089 PTHR12360 PTHR12360:SF1 SM00438 SSF57850 TMhelix TRANSMEMBRANE cd06008 mobidb-lite	17
LotjaGi6g1v0075600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NF-X1-type zinc finger protein NFXL2; TAIR: AT5G05660.1 NF-X1-type zinc finger protein NFXL2; Swiss-Prot: sp\|Q9FFK8\|NFXL2_ARATH NF-X1-type zinc finger protein NFXL2; TrEMBL-Plants: tr\|G7JBA9\|G7JBA9_MEDTR NF-X1-type zinc finger protein NFXL2; Found in the gene: LotjaGi6g1v0075600	Domains CYTOPLASMIC_DOMAIN Coil IPR000967 IPR001841 IPR019786 IPR034078 NON_CYTOPLASMIC_DOMAIN PF01422 PS01359 PS50089 PTHR12360 PTHR12360:SF1 SM00438 SSF57850 TMhelix TRANSMEMBRANE cd06008 mobidb-lite	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50