Domain Predictions — View

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cd06407

Source: CDD

Description

PB1_NLP

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 16

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0358659.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nodule inception protein [Lotus japonicus] gi\|6448579\|emb\|CAB61243.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF3 SM00666 SSF54277 cd06407 mobidb-lite	13
Lj2g3v3373110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	LjNin	Nodule inception protein [Lotus japonicus] gi\|6448579\|emb\|CAB61243.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF3 SM00666 SSF54277 cd06407 mobidb-lite	13
Lj3g3v0339060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NIN-like protein 2 [Lotus japonicus] gi\|33468532\|emb\|CAE30325.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF7 SM00666 SSF54277 cd06407 mobidb-lite	13
Lj3g3v3336070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein NLP8-like [Glycine max] gi\|356541135\|ref\|XP_003539038.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF7 SM00666 SSF54277 cd06407 mobidb-lite	13
Lj5g3v1999250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein NLP6-like [Glycine max] gi\|356535865\|ref\|XP_003536463.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF4 SM00666 SSF54277 cd06407 mobidb-lite	13
Lj5g3v1999250.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein NLP6-like [Glycine max] gi\|356535865\|ref\|XP_003536463.1\|	Domains G3DSA:3.10.20.240 IPR000270 IPR003035 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF4 SM00666 SSF54277 cd06407 mobidb-lite	13
LotjaGi1g1v0001500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT4G35270.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q7X9B9\|NLP2_ARATH Protein NLP2; TrEMBL-Plants: tr\|Q9S7B1\|Q9S7B1_LOTJA Nodule inception protein; Found in the gene: LotjaGi1g1v0001500	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF46 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi1g1v0436300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q9LE38\|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr\|Q7X9C1\|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF44 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi1g1v0436300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q9LE38\|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr\|Q7X9C1\|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF44 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi1g1v0436300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q9LE38\|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr\|Q7X9C1\|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF44 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi1g1v0436300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q9LE38\|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr\|Q7X9C1\|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF44 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi1g1v0436300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|Q9LE38\|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr\|Q7X9C1\|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF44 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi3g1v0030100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT2G43500.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp\|O22864\|NLP8_ARATH Protein NLP8; TrEMBL-Plants: tr\|Q7X9C0\|Q7X9C0_LOTJA NIN-like protein 2; Found in the gene: LotjaGi3g1v0030100	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF38 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi5g1v0299300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT4G24020.1 NIN like protein 7; Swiss-Prot: sp\|Q84TH9\|NLP7_ARATH Protein NLP7; TrEMBL-Plants: tr\|A0A0B2PWM9\|A0A0B2PWM9_GLYSO Protein NLP7; Found in the gene: LotjaGi5g1v0299300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF37 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi5g1v0299300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT4G24020.1 NIN like protein 7; Swiss-Prot: sp\|Q84TH9\|NLP7_ARATH Protein NLP7; TrEMBL-Plants: tr\|A0A0B2PWM9\|A0A0B2PWM9_GLYSO Protein NLP7; Found in the gene: LotjaGi5g1v0299300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF37 SM00666 SSF54277 cd06407 mobidb-lite	14
LotjaGi5g1v0299300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plant regulator RWP-RK family protein; TAIR: AT4G24020.1 NIN like protein 7; Swiss-Prot: sp\|Q84TH9\|NLP7_ARATH Protein NLP7; TrEMBL-Plants: tr\|A0A0B2PWM9\|A0A0B2PWM9_GLYSO Protein NLP7; Found in the gene: LotjaGi5g1v0299300	Domains G3DSA:3.10.20.90 IPR000270 IPR003035 IPR034891 PF00564 PF02042 PS51519 PS51745 PTHR32002 PTHR32002:SF37 SM00666 SSF54277 cd06407 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	6.25