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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0299300 |
| Transcript ID | LotjaGi5g1v0299300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant regulator RWP-RK family protein; TAIR: AT4G24020.1 NIN like protein 7; Swiss-Prot: sp|Q84TH9|NLP7_ARATH Protein NLP7; TrEMBL-Plants: tr|A0A0B2PWM9|A0A0B2PWM9_GLYSO Protein NLP7; Found in the gene: LotjaGi5g1v0299300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61580431..61585156) extracted from Lotus japonicus Gifu genome v1.2.
GAGACAAGTGCAAGTGCACTTCTTTTGGTAGTTGATGCCACAACAAGAAAATAAAAGTTTGCTTCTTTTTTTCTAAATAA TTTTGTTGAATAATTTATTCACAAGTGGCTAAGCCATTGTAAAAAAATTCACATGGAATCTGACTCTTATGCATTCTTCA ATTTTACCCATTGTGGTCATCATCATCTCCATCTATTCTATGCTGTTCTCACATTCCTCTTCACAGTCTAAACCCACAAA CTTCTCCTTCCAAAGTTAGCACCCTGAGAGAGAAAAATGTCAGAATCTGATGAAGAAAAGCCAGACTTTCCACAAAAGGC TAGACCAACAGAGGAACCTGGATTTGCCATGGATTTTGATCTGGATTTGGAAAGTTCATGGCCTATGGATCACATGTCCT TTGTCTCCAACCCCATGTCACCTTTTCTGTTCTCCACCATGTCTGACCAACCTTGCTCTCCTCTCTGGGCTTTCTCTGAT GGAGAAGATGATAGGCACACTAGCCTTGCAGCTCCAGCTTTCTCAGATTGCCACAAGATCTTTCCCTGTATGTATTGCTT CCTTTCAGATTGGTTTTCTATTGAGTTGAATTTTGGATTTTTCACCCATCTTCTGTACTTGCTTAATAGTTAATATCCAC TTGACTGTAACTTTAATTGATGCAACTAGTTTTGCTTTGATTGATCTGAATATGCAATATAGTCCAGAATTGATTTTATT GGTATGCACATAGCCTAGTTTACCTATGTGTTTATGTATAATGAAGAATCAATTTTTTTTTAAGAAAAACAGCCTATTAT AGTGCTTGAAGCTCCATTTGATTGCTTTGGAACTTGACTATAAGGTATAGATGATATATATGGGTTTGAAGTTGAATTTC TTTTATCTCCCTCTTCTAAACTCAACAGCTGAAGCTTCAATGCTCCATGGCTTCACATCTCTGTACTCCTTTCAATGGTA TCCAAGCAAGATAATATCTAAAGCCTAGACTTGTGGCTGGTAATTGCTTTCTTGGGCTTTTACCTTTTGCCTCTGTTATG CTACACTGTTTATGATTCTTGGAGCATTTGTAAGGTTCAGAAGTTCTAGACATATTATGAAGTTGAGATCAAATATTTTC TTGCCATAACTGTGAAGTTTTTCATCCTTTTCTCAAATGTCATTAGGTGCTTAGCATAAATTGTAGTTTTTGCTGGGAGC AGCATTTTTGCCAACTAAAGCTACTATTTTCAGGTGATTCAAATTCAGTAACTGAGAAGCCAATGGAAAATGATGACAAC AATAAGCTTTTGCCACCCGTTGTGCCTCAGCCACCTATAGAAAATTTGGATCGCTTTTGTGTAATCAAGGAAAGGATGAC ACAAGCGCTTCGCCACTTCAAAGAGTTGACTGAACTGAATGTTCTGGCTCAGGTTTGGGCACCTGTGAGGAATGGTAATC GGTATGTGCTTACAACTTCTGGTCAACCCTTTGTTCTTGACCCGCATAGTAATGGACTTCATCAGTATAGAACAGCCTCC CTGATGTACATGTTTTCTGCTGATGGAGAGAATGATGGAACTCTGGGACTTCCTGGTCGCGTTTTTCAGCATAAATTACC AGAGTGGACTCCCAATGTTCTGTACTATTCCAATAAAGAGTATCCACGACGTGATCATGCTGAACATTACAATGTTCGTG GAACCTTGGCTTTGCCTGTGTTTGAACCTGCATTGCAGTCATGTGTTGGTGTGCTGGAGTTGATAATGACTTCACAGAAG ATTAACTATGGTCCTGAGGTTGAAAAAATCTGCAAAGCCCTTGAGGTTGGGTTTCTTCCAACTTTTCTATTTATACTAAG TTTTGTAGTATGCTTATGTTTGATGTGTACCATGTGATTTTTTTTTTTGATAGGCAGATGTGTACCATGTGATGATAATA AGTTATAGTATATCAAGATTCATGGTAGAAGTTTTATATAGTTAAAATCATATTTAGATTCTTCAATCACCTGCTGTTGG TTTCTTTTTAGGCAGTAAACTTGAAGAGTTCAGAAATTTTGGAGCCTCCATACACTCAGGTGATCTTAACAATCATGCAT GACGCATCCCTATCTGTTATATCTGTATAACATTACTGTTGTTTTATACCTTACCCCTTGATTCCCACAGATATAACTTG GCAATGCTTTTAAATCAGATTTGCAATGAAGGGCGTCAGAATGCGTTATCAGAGATTTTGGAGATATTGACAGTGGTGTG TGAAACTCATAATTTACCTCTGGCCCAAACATGGGTTCCCTGTCGGCACCGGAGCGTTTTGGCACACGGTGGTGGTTTAA AGAAAATTTGTTCTAGTTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCTATAACTGATGTAGCGTCGTACATCATA GATCCTCATCTATGGGGCTTCCGCGAGGCCTGTGTTGAGCATCACTTACAACAAGGTCAAGGGGTTGCTGGGAGGGCTTT TTCGTCCCACAGCATGTGCTTCTGCCCAAACATTACCCAATTCTGCAAAACTGATTACCCCCTAGTTCATTATGCTCTCA TGTTTGGGTTAACAAGTTGTTTTGCAATCTGTTTACGGAGCTCTCATACAGGAGATGATGATTATGTGTTAGAATTTTTT CTGCCTCCTAGGATCACACACTTTAGTGAACAGAAGACACTGTTGGGATCCATATTGGCAACAATGAAACAGCACTTTCA GAGTCTTAAGATTGCTGCTGGTGTTGAACTTGAGGATGGTGGTTCAGTTGAAATTATTGAAGCAACAAATGAAAGAGTTA CGTTGAGGCTTGAATCTATTCCAATTGCTCAATCTGTTCAATCACCACCTGGACCTGGTGGCTCGCCGAATATGGTGGAG GAAGTGCCAAAGGATCCATCAGAACAACAAACAATGATGAACTGCAATGACATGAATGAAGGAGGGGCTCATGGTGATAA TGCAGGTGGAAACATTGATCAAATGTCCTCCTTAGAGACTAAAACCATGAAGAAACCCTCAGAAAGGAAACGTGGAAAAA CTGAGAAATCAATTAGTCTTGAAGTTCTACAACGTTATTTCGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGTGGT ATGTTCATACTCTGACATATAGTGATAAGCAATACTTCATTTGTTATCTTTATGCTTCTTCTGCTAGCTGGAAATACATA ACATTTATATTTACATTTATGAATCTATTACAAACGTTTGCTATACTAGAATGAAGTTCATCCTGTGGTTATTTTATCTC TAAGTCAAACATATTGTTCTTAGATGTATTCTGATTTTGCAGTTTGCCCCACTACAATGAAGCGCATCTGTAGGCAGCAC GGTATATCCCGCTGGCCATCTCGGAAGATCAACAAGGTTAACCGGTCCTTGTCCAAGCTCAAGCGTGTTATTGAATCCGT CCAAGGTGCTGAAGGAGCATTCGGTTTGAATTCTCTCAGCACAAGTCCACTTCCAGTTGTTGGTTCCTTTCCTGAGCCTT CTACTCCAAATAAGTTCAGCCAGCAAGCAAGCATGAGGCCATTAGAGTCTCAGATGAAAGAGAATGAAATTGATGCCTCT AAAATATTAGAAATTGAAGATCCATTGCTAGGAGGAATGACACAAAATCTTGAGAAAGTGTTTAATGATAAAGGTCCAAG AAGGATTAGAACTGGGAGTGGCTCTAGTGAAGATAGCACAAATCCTACTTCTCATGGTTCATGCTACGGTAGTCCCCCAA TTGAAAGTTCACATGTAAAAGACATATCCATCACATCCAACAATGAGCGATGTGTTGTGCCGAGGGGATCACCGGAGTCG TCGCCGCTGCAGCCGATTAATACGTTGAACTCACCAAGTCCTATCCCTATACCTGACATTGTGTTAACAGAACTTCAAGA GCCATTTGGAGGAATGCTAATAGAGGATGCTGGAAGTTCTAAAGACTTGAGAAATTTGTGTCCTTCAGCAGCAGAGGCCA TTTTGGAGGATCAGGTTCCAGAAGCTTGTCCAACTAATAATCCTCCAGGTTGTTCTAGTTTGGCTCCTAAGCGACCTGTG GATACACTTGGCAAAACAGTGACACCTTTCGCGGCTAAGAAAGAAATGAAAACAGTGACTATTAAGGCGACATACAGAGA AGACATCATAAGGTTTCGGGTCTCCTTGACATGTGGCATTGTGGAATTGAAAGAAGAAGTTTCCAAAAGGTTGAAACTAG AGGTGGGTACATTTGATATAAAGTACCTGGATGATGATCAAGAGTGGGTTTTGATAGCCTGTGATGCCGACCTGCAGGAG TGTATTGATGTTTCGAGATCATCAGCAAGCCACATAATCAGGGTTTTGGTGCATGATATCACTTCCAATCTGGGAAGCTC ATGTGAGAGCTCAGGGGAGTGAGAAATGGCTGTATATATAGGTTAAGTTTGTACTTAATTATGTAGATTCTTGTGATCTT TAGGACAATAGGGAAAAAATAGATTTTGGTTAAGATCTGTTCAAGTTGTAAGAAACTGAAGATTATTATTAGATCAAAGG ATTACCACTCTTGAATCTTTTGTATCACTCAAACGTAATTTATGATGAGAAAAAACTAGGATATTTTGCTGATTCATTAT GTGGTCAACTTTTAGGATCAAATATTGATACTGAAATTTAGTGTGTTTGATGTCGGTAAAGTGCAACAAGAACAAACCTT CAAGGC
CDS sequence (LotjaGi5g1v0299300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTTAAATCAGATTTGCAATGAAGGGCGTCAGAATGCGTTATCAGAGATTTTGGAGATATTGACAGTGGTGTGTGA AACTCATAATTTACCTCTGGCCCAAACATGGGTTCCCTGTCGGCACCGGAGCGTTTTGGCACACGGTGGTGGTTTAAAGA AAATTTGTTCTAGTTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCTATAACTGATGTAGCGTCGTACATCATAGAT CCTCATCTATGGGGCTTCCGCGAGGCCTGTGTTGAGCATCACTTACAACAAGGTCAAGGGGTTGCTGGGAGGGCTTTTTC GTCCCACAGCATGTGCTTCTGCCCAAACATTACCCAATTCTGCAAAACTGATTACCCCCTAGTTCATTATGCTCTCATGT TTGGGTTAACAAGTTGTTTTGCAATCTGTTTACGGAGCTCTCATACAGGAGATGATGATTATGTGTTAGAATTTTTTCTG CCTCCTAGGATCACACACTTTAGTGAACAGAAGACACTGTTGGGATCCATATTGGCAACAATGAAACAGCACTTTCAGAG TCTTAAGATTGCTGCTGGTGTTGAACTTGAGGATGGTGGTTCAGTTGAAATTATTGAAGCAACAAATGAAAGAGTTACGT TGAGGCTTGAATCTATTCCAATTGCTCAATCTGTTCAATCACCACCTGGACCTGGTGGCTCGCCGAATATGGTGGAGGAA GTGCCAAAGGATCCATCAGAACAACAAACAATGATGAACTGCAATGACATGAATGAAGGAGGGGCTCATGGTGATAATGC AGGTGGAAACATTGATCAAATGTCCTCCTTAGAGACTAAAACCATGAAGAAACCCTCAGAAAGGAAACGTGGAAAAACTG AGAAATCAATTAGTCTTGAAGTTCTACAACGTTATTTCGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGTGTTTGC CCCACTACAATGAAGCGCATCTGTAGGCAGCACGGTATATCCCGCTGGCCATCTCGGAAGATCAACAAGGTTAACCGGTC CTTGTCCAAGCTCAAGCGTGTTATTGAATCCGTCCAAGGTGCTGAAGGAGCATTCGGTTTGAATTCTCTCAGCACAAGTC CACTTCCAGTTGTTGGTTCCTTTCCTGAGCCTTCTACTCCAAATAAGTTCAGCCAGCAAGCAAGCATGAGGCCATTAGAG TCTCAGATGAAAGAGAATGAAATTGATGCCTCTAAAATATTAGAAATTGAAGATCCATTGCTAGGAGGAATGACACAAAA TCTTGAGAAAGTGTTTAATGATAAAGGTCCAAGAAGGATTAGAACTGGGAGTGGCTCTAGTGAAGATAGCACAAATCCTA CTTCTCATGGTTCATGCTACGGTAGTCCCCCAATTGAAAGTTCACATGTAAAAGACATATCCATCACATCCAACAATGAG CGATGTGTTGTGCCGAGGGGATCACCGGAGTCGTCGCCGCTGCAGCCGATTAATACGTTGAACTCACCAAGTCCTATCCC TATACCTGACATTGTGTTAACAGAACTTCAAGAGCCATTTGGAGGAATGCTAATAGAGGATGCTGGAAGTTCTAAAGACT TGAGAAATTTGTGTCCTTCAGCAGCAGAGGCCATTTTGGAGGATCAGGTTCCAGAAGCTTGTCCAACTAATAATCCTCCA GGTTGTTCTAGTTTGGCTCCTAAGCGACCTGTGGATACACTTGGCAAAACAGTGACACCTTTCGCGGCTAAGAAAGAAAT GAAAACAGTGACTATTAAGGCGACATACAGAGAAGACATCATAAGGTTTCGGGTCTCCTTGACATGTGGCATTGTGGAAT TGAAAGAAGAAGTTTCCAAAAGGTTGAAACTAGAGGTGGGTACATTTGATATAAAGTACCTGGATGATGATCAAGAGTGG GTTTTGATAGCCTGTGATGCCGACCTGCAGGAGTGTATTGATGTTTCGAGATCATCAGCAAGCCACATAATCAGGGTTTT GGTGCATGATATCACTTCCAATCTGGGAAGCTCATGTGAGAGCTCAGGGGAGTGA
Protein sequence (LotjaGi5g1v0299300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLNQICNEGRQNALSEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGLKKICSSFDGSCMGQVCMSITDVASYIID PHLWGFREACVEHHLQQGQGVAGRAFSSHSMCFCPNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGDDDYVLEFFL PPRITHFSEQKTLLGSILATMKQHFQSLKIAAGVELEDGGSVEIIEATNERVTLRLESIPIAQSVQSPPGPGGSPNMVEE VPKDPSEQQTMMNCNDMNEGGAHGDNAGGNIDQMSSLETKTMKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVC PTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPVVGSFPEPSTPNKFSQQASMRPLE SQMKENEIDASKILEIEDPLLGGMTQNLEKVFNDKGPRRIRTGSGSSEDSTNPTSHGSCYGSPPIESSHVKDISITSNNE RCVVPRGSPESSPLQPINTLNSPSPIPIPDIVLTELQEPFGGMLIEDAGSSKDLRNLCPSAAEAILEDQVPEACPTNNPP GCSSLAPKRPVDTLGKTVTPFAAKKEMKTVTIKATYREDIIRFRVSLTCGIVELKEEVSKRLKLEVGTFDIKYLDDDQEW VLIACDADLQECIDVSRSSASHIIRVLVHDITSNLGSSCESSGE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 683 | 680 | 0.0 | – | |
| PANTHER | 4 | 683 | 680 | 0.0 | – | |
| MobiDBLite | 220 | 248 | 29 | - | – | |
| ProSiteProfiles | 283 | 364 | 82 | 17.677 | ||
| Pfam | 297 | 344 | 48 | 9.8E-26 | ||
| MobiDBLite | 430 | 469 | 40 | - | – | |
| MobiDBLite | 443 | 462 | 20 | - | – | |
| MobiDBLite | 481 | 502 | 22 | - | – | |
| Gene3D | 586 | 673 | 88 | 2.0E-13 | – | |
| SUPERFAMILY | 587 | 674 | 88 | 5.23E-23 | – | |
| ProSiteProfiles | 589 | 671 | 83 | 25.247 | ||
| SMART | 589 | 671 | 83 | 1.4E-25 | ||
| Pfam | 589 | 670 | 82 | 5.2E-19 | ||
| CDD | 590 | 670 | 81 | 2.18822E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0299300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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