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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1999250 |
| Transcript ID | Lj5g3v1999250.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein NLP6-like [Glycine max] gi|356535865|ref|XP_003536463.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 684 | 681 | 0 | – | |
| PANTHER | 4 | 684 | 681 | 0 | – | |
| MobiDBLite | 220 | 248 | 29 | – | – | |
| ProSiteProfiles | 283 | 364 | 82 | 17.006 | ||
| Pfam | 297 | 344 | 48 | 4.50E-24 | ||
| MobiDBLite | 430 | 469 | 40 | – | – | |
| MobiDBLite | 481 | 502 | 22 | – | – | |
| SUPERFAMILY | 587 | 674 | 88 | 5.23E-23 | – | |
| ProSiteProfiles | 589 | 671 | 83 | 25.247 | ||
| Pfam | 589 | 670 | 82 | 7.40E-19 | ||
| SMART | 589 | 671 | 83 | 1.40E-25 | ||
| Gene3D | 589 | 670 | 82 | 5.20E-26 | – | |
| CDD | 590 | 670 | 81 | 6.80E-39 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1999250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1999250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.