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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0001500 |
| Transcript ID | LotjaGi1g1v0001500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant regulator RWP-RK family protein; TAIR: AT4G35270.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp|Q7X9B9|NLP2_ARATH Protein NLP2; TrEMBL-Plants: tr|Q9S7B1|Q9S7B1_LOTJA Nodule inception protein; Found in the gene: LotjaGi1g1v0001500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:494119..498452) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTCTTTAATTAATTTTGTTTAGAGTCAAGTTCATCATGATAATCTGCCACTATTATATAGCCGGTGTTGCGCATAGA TGGGTAGATATAGATATATGTTATTAATTACAGCTGCTACAGCCACAGAGTACAAAGAAAGAATTGAAAGAAAGGCGTGA GACTTTACATTACATTATTAATTGATGATATAGAAATAGAAATAGAAATAGGAATAGGTAGAGTCGACAGACATCCCGAA TTACTAGCATTTTGTACCCTTCAATCCTATAATAACAGGAATAATATACCATTCTTGTCTCTTTCTGAATTTACTCCCTT ATTAATATTCTTTCCTCAAGTCATGAGTAGTTAAGTTTTAGAAGCTTGTTGTTTTGCTGTGTTGTTTCTTACTCGAGAGG CAGCAAGCATATACTGAATACTACATTTATTTATAGAATATAATAATAATTTACAGCTGATAACTATGAAAGAATATTTA TTTATATGTTATATGTATTGTATATACCTGCCACGGTGAGGGGGGATTAGGGATATAAAAACTGGAGACCACTCTTTGAT TTTGCTTACACTTGTGGGTCCTAGCAAGATACAATTAAAGAAATTTTGGGTTTTAAATAAGAGACTTGTTGATCGCATGT TGAGGCAAGGCAATCATTTTCCCAAGCACTGCTTATTAATTACAAACCACCTTCTCATCTCTTGCTCTTCAACTTAGCAC TAGACAGAATCTAGCTTCAAACCTAATTAAGGTGAGTGAGTCTTGTACTTGATCCACTCTTGATATTCATGCCCTCACTT TCTTTCTCACTTACTATGTGTTTGTGGATATGTCTGAATTAATGATGATTCAACTCACTTAACTGATCATGTCAAATTAC AGGTACTTAATTGGATCAGCTAGCATGGAATATGGTTCATTACTAGTGCAGCAGCAGCAGCAGCAGGATTGTAATTCTGC CTATGGGAGCTTGTCTAATTTATCATCAGACTGTGGATCAGTGACAACAGCAGAAGCAGATCATCACATCATTGAGGAGC TGTTAGTACAAGGTTGCTGGGTGGAAGTTAGTGGTGTTGGTGTTAGGGAGGGTGAGCTCCAGCTCCAACAAGACGAATCA AGTTTTGTGGTGGGGAAGAGATGGTGGATTGGACCAGCTGCAGCAGTAGCAGGATCATGTAATTCCTCTGTCAAAGAGAG ACTAGTGATTGCTGTTGGGTACTTGAAAGACTACACAAGAAACTCCAACGTGCTCATTCAGATATGGGTGCCCTTACGAA GAGGCATCCTTCATGATCATGATTACCACACAAATTATTTACTTTCCAATAATCCTCCTCCTCAACCAGAAGCAGCAGCA GATCATGAATCTGTTTCACTTGGTTTTCCCATGCCAGCAGCTCCCAACTCAAACTTATACTCAAACGTGCACGTCCGTTT TTTTAGAAGCCACGAGTACCCGCGCGTTCAGGCTCAGCAGTATGGATCTTTAGCCCTTCCTGTCTTCGAAAGAGGCACCG GGACATGCCTTGGTGTCCTTGAGATTGTAATCACCAACCAAACCACCATCAACTACAATGTCTCCAATGCTCTTGATCAG GTACCTAGCTACTTTACTTGATTACTTTTCTTCTATCTACTCCCAATATTTCAGTAAAATGTGGTACTGATTATCACTTC AATAACCGCTCACACTTACAAGCCTTTTGTATCCAATTAATGTTTTGCAGGCTGTTGATTTTAGAAGCAGCCAGAGCTTC ATTCCACCTGCCATCAAGGTAGTGTGCCCTAATTATTTGTAAGGATGGATGTTCTTCATTATTTAAAGTTTAAGAAACAA TAATTAATTAATAAATATTTATGATTAATGATGATTAGGTATATGACGAGTTGTACCAAGCAGCAGTGAATGAGATCATA GAGGTGATGACTTCTGTTTGCAAGACACACAATTTGCCATTAGCACTCACTTGGGCTCCTTGCATCCAACAAGGCAAGTG TGGTTGTGGGGTTTCATCTGAGAATTACATGTGGTGCGTCTCCACCGTGGATTCTGCGTGCTTTGTTGGGGATCTAGACA TATTGGGATTCCAAGAAGCGTGCTCTGAGTATCACCTTTTCCGGGGACAAGGAATTGTTGGTACAGCCTTCACAACATCC AAACCGTGTTTCGCCATTGACATCACAGCCTTCAGCAAAGCTGAATACCCTCTTGCTCACCATGCAAACATGTTCGGATT GCATGCAGCTGTGGCCATTCCACTCAGGAGTGTCTACACCGGTTCAGCTGCTGATTTTGTTTTGGAGTTTTTCCTTCCAA AAGATTGCCATGACAGTGAAGAGCAGAAGCAGTTGCTCAACTCATTGTCCATGGTGGTACAGCAAGCTTGCCGCAGCTTG CATGTGGTACTGGTGGAGGATGAATACACCTTGCCGATGCCATCACACACTAGTAAAGAGGAATTAGAAGAAGAAGAGAT TACCATTACCAATAATCATGAGCAGAAATTATTTGTGTCTCCCTCCTCTCATGAATCAGAATGTTCAAAAGAATCATCAT GGATTGCACACATGATGGAGGCTCAGCAGAAGGGGAAAGGTGTGTCTGTGTCTTTGGAGTACTTGGAAGAACCAAAGGAG GAGTTCAAAGTAACAACAAACTGGGACAGCAGCACTGACCATGATCAGCAGGCGCAGGTGTTTTCATCAGATTTTGGGCA AATGAGTTCAGGATTCAAAGCAAGTACTGTGGAGGGTGGGGATCAAGAGTCTTCTTATACCTTTGGAAGCCGCCGCTCGT CTTCTGGTGGAAGAAAGTCAGGCGAGAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCAAGTTCTAAGACAGTAC TTTGCAGGAAGCCTAAAAGATGCAGCAAAGAGCATTGGTGGTGAGTGACATATCTTCTTGAATTCAACTCAACCATTCAA TTAATTATTAAATGATAACAAAGTTAATTTAGTGGGTGACTTAATTAAGAAAGTGATCCTTGTATGGTTGTACAGTTAAA TGATGGTGTTTCCTTTTGATTTCTACAGTATGTCCCACAACTCTGAAAAGGATATGCAGACAGCATGGCATCACCAGGTG GCCTTCAAGGAAAATCAAGAAGGTTGGCCATTCTTTAAAAAAGCTTCAGCTGGTGATTGATTCAGTGCAGGGTGCTGAGG GTGCCATACAGATTGGCTCATTCTATGCCAGTTTTCCAGAGTTGAGCTCTTCAGATTTCTCTGCCAGTTGCCGTTCTGAT TCATCCAAGAAAATGCATAATTATCCTGATCAGAACAACACCTTGTATGGCCATGGAGATCATGGAGGAGTTGTTACTAG TTTAAAATCTCCACCCTCTGCTTGCAGCCAAACTTTTGCAGGAAACCAACCATGCACCATCATCAACAATGGAGATGTTC TTATGACAGAAAGTCCTCCAGTCCCTGAAGCATTGCTGAGTAGGAGAGATCACTGTGAGGAAGCAGAATTATTGAACAAT GCATCTATCCAAGAGGATACAAAGCGTTTCAGCAGACCCAAGAGCCAAACCCTACCTCCCTTGTCTGACAGCAGTGGCTG GAACTCACTGGAAACAGGTGCTTTCAGAGTGAAAGCAACTTTTGCAGATGAGAAGATCCGCTTCAGCTTGCAACCCATTT GGGGGTTCAGTGATTTGCAGCTAGAGATAGCAAGACGGTTCAATCTAAATGATGTGACCAACATCCTTCTCAAGTATCTG GATGATGATGGAGAGTGGGTAGTTTTAGCATGTGATGGTGATCTTGAGGAGTGCAAAGACATACACAGATCATCTCAGAG CCGGACAATTAGACTCTCCCTTTTTCAAGCTTCGCCTCTAAATCTAGCTAATACATTCCGCAATAGCAGCCCATCTTAAC ATAACACCAATTCTCTGCTTTTCTTGAGCTTTAAGCCTCAAGAGAGAGGTGTGTTTGTTTGTGTATACTGTGTAGGATCC CAATCCCAATCCCATCCCAAGCAAACATATACATTTAATTACTGGTTTTACTTGTTTGAGTTGGCGGCTTTGTCCAATTA CCTCATGTTCACAACTTTCACAAGTGAGAACCGTTTTATATTTTCCATAGATAGAATTTCAAATGATTAATTTCATTACG TTCAAGAATTCATATGCAAGACCTCGCTCATAATTAAGATCTCTCATCTTATCCCAGGACCATTCTTAATTAGTAGAGGA ACTATCAAGGATAGAGTCAGTTATATTAATATGCCATATGCCTAAGGTATTAATTAAGCAAAAAACAATTTTAAAAAAAG ACAAAGTGAGAGAG
CDS sequence (LotjaGi1g1v0001500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATATGGTTCATTACTAGTGCAGCAGCAGCAGCAGCAGGATTGTAATTCTGCCTATGGGAGCTTGTCTAATTTATC ATCAGACTGTGGATCAGTGACAACAGCAGAAGCAGATCATCACATCATTGAGGAGCTGTTAGTACAAGGTTGCTGGGTGG AAGTTAGTGGTGTTGGTGTTAGGGAGGGTGAGCTCCAGCTCCAACAAGACGAATCAAGTTTTGTGGTGGGGAAGAGATGG TGGATTGGACCAGCTGCAGCAGTAGCAGGATCATGTAATTCCTCTGTCAAAGAGAGACTAGTGATTGCTGTTGGGTACTT GAAAGACTACACAAGAAACTCCAACGTGCTCATTCAGATATGGGTGCCCTTACGAAGAGGCATCCTTCATGATCATGATT ACCACACAAATTATTTACTTTCCAATAATCCTCCTCCTCAACCAGAAGCAGCAGCAGATCATGAATCTGTTTCACTTGGT TTTCCCATGCCAGCAGCTCCCAACTCAAACTTATACTCAAACGTGCACGTCCGTTTTTTTAGAAGCCACGAGTACCCGCG CGTTCAGGCTCAGCAGTATGGATCTTTAGCCCTTCCTGTCTTCGAAAGAGGCACCGGGACATGCCTTGGTGTCCTTGAGA TTGTAATCACCAACCAAACCACCATCAACTACAATGTCTCCAATGCTCTTGATCAGGCTGTTGATTTTAGAAGCAGCCAG AGCTTCATTCCACCTGCCATCAAGGTATATGACGAGTTGTACCAAGCAGCAGTGAATGAGATCATAGAGGTGATGACTTC TGTTTGCAAGACACACAATTTGCCATTAGCACTCACTTGGGCTCCTTGCATCCAACAAGGCAAGTGTGGTTGTGGGGTTT CATCTGAGAATTACATGTGGTGCGTCTCCACCGTGGATTCTGCGTGCTTTGTTGGGGATCTAGACATATTGGGATTCCAA GAAGCGTGCTCTGAGTATCACCTTTTCCGGGGACAAGGAATTGTTGGTACAGCCTTCACAACATCCAAACCGTGTTTCGC CATTGACATCACAGCCTTCAGCAAAGCTGAATACCCTCTTGCTCACCATGCAAACATGTTCGGATTGCATGCAGCTGTGG CCATTCCACTCAGGAGTGTCTACACCGGTTCAGCTGCTGATTTTGTTTTGGAGTTTTTCCTTCCAAAAGATTGCCATGAC AGTGAAGAGCAGAAGCAGTTGCTCAACTCATTGTCCATGGTGGTACAGCAAGCTTGCCGCAGCTTGCATGTGGTACTGGT GGAGGATGAATACACCTTGCCGATGCCATCACACACTAGTAAAGAGGAATTAGAAGAAGAAGAGATTACCATTACCAATA ATCATGAGCAGAAATTATTTGTGTCTCCCTCCTCTCATGAATCAGAATGTTCAAAAGAATCATCATGGATTGCACACATG ATGGAGGCTCAGCAGAAGGGGAAAGGTGTGTCTGTGTCTTTGGAGTACTTGGAAGAACCAAAGGAGGAGTTCAAAGTAAC AACAAACTGGGACAGCAGCACTGACCATGATCAGCAGGCGCAGGTGTTTTCATCAGATTTTGGGCAAATGAGTTCAGGAT TCAAAGCAAGTACTGTGGAGGGTGGGGATCAAGAGTCTTCTTATACCTTTGGAAGCCGCCGCTCGTCTTCTGGTGGAAGA AAGTCAGGCGAGAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCAAGTTCTAAGACAGTACTTTGCAGGAAGCCT AAAAGATGCAGCAAAGAGCATTGGTGTATGTCCCACAACTCTGAAAAGGATATGCAGACAGCATGGCATCACCAGGTGGC CTTCAAGGAAAATCAAGAAGGTTGGCCATTCTTTAAAAAAGCTTCAGCTGGTGATTGATTCAGTGCAGGGTGCTGAGGGT GCCATACAGATTGGCTCATTCTATGCCAGTTTTCCAGAGTTGAGCTCTTCAGATTTCTCTGCCAGTTGCCGTTCTGATTC ATCCAAGAAAATGCATAATTATCCTGATCAGAACAACACCTTGTATGGCCATGGAGATCATGGAGGAGTTGTTACTAGTT TAAAATCTCCACCCTCTGCTTGCAGCCAAACTTTTGCAGGAAACCAACCATGCACCATCATCAACAATGGAGATGTTCTT ATGACAGAAAGTCCTCCAGTCCCTGAAGCATTGCTGAGTAGGAGAGATCACTGTGAGGAAGCAGAATTATTGAACAATGC ATCTATCCAAGAGGATACAAAGCGTTTCAGCAGACCCAAGAGCCAAACCCTACCTCCCTTGTCTGACAGCAGTGGCTGGA ACTCACTGGAAACAGGTGCTTTCAGAGTGAAAGCAACTTTTGCAGATGAGAAGATCCGCTTCAGCTTGCAACCCATTTGG GGGTTCAGTGATTTGCAGCTAGAGATAGCAAGACGGTTCAATCTAAATGATGTGACCAACATCCTTCTCAAGTATCTGGA TGATGATGGAGAGTGGGTAGTTTTAGCATGTGATGGTGATCTTGAGGAGTGCAAAGACATACACAGATCATCTCAGAGCC GGACAATTAGACTCTCCCTTTTTCAAGCTTCGCCTCTAAATCTAGCTAATACATTCCGCAATAGCAGCCCATCTTAA
Protein sequence (LotjaGi1g1v0001500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYGSLLVQQQQQQDCNSAYGSLSNLSSDCGSVTTAEADHHIIEELLVQGCWVEVSGVGVREGELQLQQDESSFVVGKRW WIGPAAAVAGSCNSSVKERLVIAVGYLKDYTRNSNVLIQIWVPLRRGILHDHDYHTNYLLSNNPPPQPEAAADHESVSLG FPMPAAPNSNLYSNVHVRFFRSHEYPRVQAQQYGSLALPVFERGTGTCLGVLEIVITNQTTINYNVSNALDQAVDFRSSQ SFIPPAIKVYDELYQAAVNEIIEVMTSVCKTHNLPLALTWAPCIQQGKCGCGVSSENYMWCVSTVDSACFVGDLDILGFQ EACSEYHLFRGQGIVGTAFTTSKPCFAIDITAFSKAEYPLAHHANMFGLHAAVAIPLRSVYTGSAADFVLEFFLPKDCHD SEEQKQLLNSLSMVVQQACRSLHVVLVEDEYTLPMPSHTSKEELEEEEITITNNHEQKLFVSPSSHESECSKESSWIAHM MEAQQKGKGVSVSLEYLEEPKEEFKVTTNWDSSTDHDQQAQVFSSDFGQMSSGFKASTVEGGDQESSYTFGSRRSSSGGR KSGEKRRTKAEKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEG AIQIGSFYASFPELSSSDFSASCRSDSSKKMHNYPDQNNTLYGHGDHGGVVTSLKSPPSACSQTFAGNQPCTIINNGDVL MTESPPVPEALLSRRDHCEEAELLNNASIQEDTKRFSRPKSQTLPPLSDSSGWNSLETGAFRVKATFADEKIRFSLQPIW GFSDLQLEIARRFNLNDVTNILLKYLDDDGEWVVLACDGDLEECKDIHRSSQSRTIRLSLFQASPLNLANTFRNSSPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 873 | 838 | 6.5E-301 | – | |
| PANTHER | 36 | 873 | 838 | 6.5E-301 | – | |
| MobiDBLite | 534 | 570 | 37 | - | – | |
| MobiDBLite | 534 | 557 | 24 | - | – | |
| ProSiteProfiles | 560 | 641 | 82 | 17.53 | ||
| Pfam | 573 | 621 | 49 | 8.3E-25 | ||
| MobiDBLite | 749 | 770 | 22 | - | – | |
| SUPERFAMILY | 770 | 865 | 96 | 1.86E-23 | – | |
| Gene3D | 778 | 861 | 84 | 3.4E-11 | – | |
| SMART | 780 | 863 | 84 | 4.4E-28 | ||
| ProSiteProfiles | 780 | 863 | 84 | 23.264 | ||
| Pfam | 781 | 862 | 82 | 3.6E-15 | ||
| CDD | 781 | 862 | 82 | 3.54669E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0001500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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