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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0436300 |
| Transcript ID | LotjaGi1g1v0436300.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant regulator RWP-RK family protein; TAIR: AT1G20640.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp|Q9LE38|NLP4_ARATH Protein NLP4; TrEMBL-Plants: tr|Q7X9C1|Q7X9C1_LOTJA NIN-like protein 1; Found in the gene: LotjaGi1g1v0436300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93068397..93073971) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAATAAGAGAGGATGATGAATCATAGATAGAGATAGAGGTTTATATTGGTATATGGTGAGGTTTGCTTAGCTTGTGG TTTGACTTTACCGGGAGAACGAGACTTACAAAGCCTCACATAGAGTTTTGTGGTGTGGGGTAGGAATCCTCATCAGTATC TTCTTTTTCCCTTTTGCTTAGATTGGAATCATCATCATTATCATTCTCTGCCTCCTTCTACTAACAACACTGTCCCCCTG CCTCCTACAGAAAGAGCTTCTTCACTTCTTGGTTGCTACTGCTACTTGCTCAACTTCTTTCTAATTATGAGTATCACTAT CATCACGAACCTTTCATGTTTCTTTTAATTATTGCTTGCTACTTGCTCAAATTCAGAGTTTCTGGCCTTTATTTTCCTTG GAGGTTAGCTTGAATTATTATTATTATTATTATTTTGGTGGATTGGATTAGCATGAACATGAATGAACTGGAACATTATA AAACAGTTCAAAGTTCAAACAACAAAAAAATTAAAAAATAATAAAACCCATACTTGGTATCTTCAAGAATCTTTTACATG AGGAGGAGCTATCCATATTCTTTTTCTCCTCACCTTTACCAGTCCAAGTTTGATTCCACATGCAAAAAGATTAATTGCTT TCATCCACTAGAACTATCATTTCCTGTAAAGTGTGTATGAGGGTATCTTTCTGGTCCAACTCTCTTTCTTTTTGTTGGAT TGAGACTTTGTAGTCATCCAATTTTTTCATGGAATATATTCTATTTCTGTGTGGGAGTGAAAATTTGAGTCCGTTCAGCA AAAATCACATCTTTTCCTATTTTGAAGATCTAATATAATCATCATCATGTTGTTGTTTCTCTGTTTCTTATTCTTCCTCC AATATCATTACTTACTGACATCATTGACAACTTTGGACAGACAACAACGTTTGGAGACTGAAGACTGAAAGGTTCCTCAC CCTTTTTGACAAGGTTTTTCAGATCTGTTTGGTAGCTGAAACATGGGCTTAAAGATTCTAGAAGCAACTGTGTGAGTTTA AGGGTTGAGAAAGAAGTAGAAGCAACCATCATGGCAGGTTTCTAAATTGCGGTTGGCAATTGCAATTGCGGTCGTTTCAA CCTGCATTTGTCCGCAATTCCACGACGCAGCAGTGACAACAAGTGCAATTTAAAACCCTGATTATGGGGGATGGTGCTGT GACAACAACATCTGCAGCCATGATGGAAGCTCCAACAAATGAAACCTCGATGGATTTTGAATACATGAGTGATCTTCTCT TAGATGGTTGCTGGTTGGAAGCTTCTGCTGATGGATCAAATTTCTTGCTGCAGCAAAGTCCTCCTTTTTCAAGTCCTCTA TTTGACCCTTCATTCTCATGGCCTGCTTTAGAAACCAATGAGCCAACCCATGTTGAGGATCAACATGAATCACAAGAAGC TCCTCTTGGCAACACCCAATTAGTGAGCCAGAGCCAGAACATGGTTAATGTTGTTGATGGTAGGTATAATAATCAGTCTG AAACTGAAACTCATTCAGTTGTAGAAGGTACTTCTGATGGGGTTAAGAGGTGGTGGATTGCACCTACATGTAGTCCTGGA CTTGGACCTTCCATAATGGAGAAGCTGATAAGGGCCCTGAAATGGATCAAACAATTCAATTGGAACAAAGACATGCTCAT ACAAATTTGGGTGCCAGTTCCTCGAGGTGATAGGCCTATTCTATCAGCTAACAATCTTCCATTTTCACTTGATTCTGGGT CTGAAAACCTTGCAAGGTACCGAGAAATCTCTGAGGGGTTTCAGTTTTCAGCAGAGGAGGACTCCAAGGAGTTGGTGCCG GGATTGCCGGGTCGAGTTTTCCGGGACAAGGTTCCTGAGTGGACTCCTGATGTGAGGTTCTTCAGGAGTGATGAGTACCC GCGTGTCGAACATGCTCGAGAGTTTGACATATGTGGAACATTAGCAGTGCCAATCTTTGAGCAAGGTAGCAGGACTTGCT TGGGTGTTATTGAGGTTGTGATGACTACACAGCAGATCAATTATGTCCCTCAACTTGAGAGTGTTTGCAAGGCACTTGAG GTATTTCTCCTAGCTTTTTTTTGCATAAATTTCTGTTGTGATGTTACCATCTTTAGAATAAAGAGAATTTTGGGTTTTAA AACAGTGGAATTTTAGGATGCTTTCAATATATGCTTGGTTTCGCGTTGCTCATCCACAGAAACACTTCTAATCTTCTTTG ACGTGGTTTTTCATCAGAACATGTTTAGGTGAAATTCTTAGAAGCATTTCAGGCTAAACAAAAACATGATGGGACCAAAG CAAAAAGACCAAGATTTTGAGTTAACATGATGATTTTAGTTATTCTCACAATAGATTCCTATTATTTTCCTGTTAAAATC ACTTTTACAGTAAATGTACCCAAAAATAAATCACATCAACTTCTACTCACTTTTACCATGATCAATTTTTCTGAGAATCA TTTATATCCAAACTTACTTCTCCTGACGCTAAACCAAACATGTACTTAATGTGCTATTTGCTGTTTCTGAAGGGGTAGTA AACTGCATTTCTTCCTTATGGCTCAAAGCATTTTCTTACTACATCACTTTTGTACCTTAAAACCCTCAGCCCCCTGCAAA ATATCCTCTTTTTCTGTTTGTCAATCCATATTTTTTGCAATAATCTTATGTTTTTCTCTCTTGTAATTGAATTGTTTTAT CTGTATAAATGCTTATGGCAACGAATGGTTTAATATGTCAAATATGAAGCTCATCAAAACTCATCTATTTTAGTTTAATA ATCGGGGGAAGATTTTTACCTTGCAGGTTGTTGATCTTACAAGCTTGAAACATTCAAGTATTCAGAATGCAAAGGTAAAT GGAAAATCACCTCAGAGGAAGATTTTAGTGAACTTAAGTTCTCAATTTCCTCATGACTACTGGTTTTATTTTAGCAGGCA CGTGACAAGTCGTATGAAGCTGCACTACCCGAGATTCAAGAGGTGCTGAGATCTGCATGTCATATGCACAAATTACCTTT AGCTCAAACTTGGGTCTCGTGCTTTCAACAAGGCAAAGATGGGTGCCGGCATTCTGAAGATAATTACTTACACTGCATAT CTCCTGTGGAGCAAGCTTGCTATGTTGGTGATCCCTCTGTTAGGTTCTTTCATGAGGCTTGCATGGAGCATCACTTGTTA AAAGGTCAAGGTGTTGCTGGGAAAGCTTTCATGATAAATCAACCATTCTTCTCAACCGACATAACTATGTTAAGCAAGAC AGACTATCCACTGTCTCATCATGCCAGATTGTTCGGATTGCGCGCTGCAGTTGCCATACGCCTCCGAAGCATCTATAGTA GTGCAGATGACTATGTTCTAGAGTTCTTCTTGCCTGTGAATTGCAATGACAGTGAAGAACAGAAAAACATGCTTATATCA TTGTCCATAATTATACAAAGGTGTTGCCGCAGCTTGCGGGTTATAACAGATAAGGAATTGGAGAGAACTAGCTCATCAGT TGAAGTGATGGCCCTTGAAGATAGTGGATTTGCTAGGACTGTGAAATGGTCAGAACCCCAACACATAACAAGTGTTGCCT CATTGGAACCTGAAGAAAAATCAAGTGAAACAGTGGGTGGAAAATTCTCTGATCTAAGGGAACATCAAGAAGATTCTATT TTAAAAGGAAACATTGAGTGTGATAGGGAGTGTTCTCCTTTTGTTGAAGGTAACTTATCAAGTGTGGGAATAAGTAAAAC CGGAGAGAAAAGGCGAGCCAAAGCAGATAAAACTATCACTCTGGAAGTTCTTAGGCAATATTTTCCTGGAAGCCTAAAAG ATGCTGCAAAGAATATTGGTGGTAAGCCTAATACTACACGAGCATATCTTCATGTTATGTTTTTGTATGCAAACACTAAG GTAGCTTTTGGCACACCCGAATAAATATGAAAGATTCTGTCATGTTCTCCTTGCTTCCACCCTTTTTAGCAGAACTAAGA TGTACAATTTTCTTTTTTACCTTATCTCTTGTTTTGTTCTATTTTTTAAATCAATCAAACATAAAGTAAAACCTTATGAT TTGTTGTGTCCATTGACTTCATTCTAACACATCTATCAAATACAGTGTAGTTTGAGAGACTTGCATTTCTATGTCAATAC TATGTTTCTTATAGCTCAGTTTTCTTACGTTAATTTCATACAAGTAAGATTATTTAGTTCTACCTATATGGCCAACAAAG AAAAAAGCTTTGGTTACGGTTGCACAAGTATCTTATATGTTGGATTAGGATTCTCTTATGTCACTTGACAATGTGATGTG AAATGTGGTGTTTATCTCTCTTCATAAACTTTTAGAGTTCCACATGTTTTATTCATATAAAGAGAGATACACACAAAATT TTAACATGGCAAGGTCATGTGAAGTTTAACATGAGAGCATTCTGATCCCATATATGTTAGTTGTTTCATTGCATATCTAT TACTATTTGAAAGTCTTTCATTAAACCATCTTTTGGATTAAATTTTGCAGTTTGTACTACAACTTTGAAAAGGGTATGCC GACAACATGGGATAAAGCGTTGGCCTTCTAGAAAGATCAAGAAGGTTGGTCACTCCTTACAGAAACTCCAACTTGTCATT GACTCAGTTCAAGGTGCCTCTGGTGCATCATTTAAAATTGATTCCTTCTATTCGAACTTCCCGGATCTAGCTTCTCCAAA TTTATCAGGAGCCAGCCTGGTCTCAGCTCTGAATCAAAGTGAAAATCCAAACTCATTAAGCATACAACCTGATCTTGGCC CGTTGAGCCCAGAAGGTGCAACCAAATCACTCTCTTCCTCATGCAGCCAGGGTTCCCTTTCAAGCCATTCCTGTTCCAGC ATGCCAGAGCAACAACCTCACACAAGTGATGTTGCTTGTAACAAAGATCCTGTGGTTGGTAAAGACTCTGCTGATGTTGT GTTGAAGAGGATCAGAAGTGAAGCAGAGCTTAAAAGCCACAGTGAAAATAAAGCAAAACTCTTCCCCAGATCTCTAAGCC AGGAAACACTTGGTGAACACACTAAAACCGAGTATCAAAGTTACTTATTAAAAACCTGTCACAAAGCAACTCCAAAGGAG GATGCTCACAGAGTAAAAGTTACATATGGAGATGAAAAAACCCGGTTTCGGATGCCAAAGAGTTGGAGCTATGAACATCT TTTGCAGGAAATTGCTAGGAGATTTAATGTGAGTGATATGAGCAAATTTGATGTTAAATATTTGGATGATGACTTAGAAT GGGTATTACTAACTTGTGATGCTGATTTAGAGGAGTGCATTGATGTTTGTCTATCTTCTGAGAGTAGTACCATTAAACTT TGCATACAAGCTTCTAGTGGTATGAGAAGTTAATAGAATTTAGGTAACACTGGCCTTTTAAGATTGTATATTACTAAGTT TAAGATAAGATCCTTTGTATGTATATGAAAATCATTCTTATCAAGTTTGTAGTTTGAAGACACAATTCTTTTGTTTATCA TATATACTCAAAGCAATAACCAGGTTTTCTTTATTATAAGTTTCTAACAGTTAAG
CDS sequence (LotjaGi1g1v0436300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGATGGTGCTGTGACAACAACATCTGCAGCCATGATGGAAGCTCCAACAAATGAAACCTCGATGGATTTTGAATA CATGAGTGATCTTCTCTTAGATGGTTGCTGGTTGGAAGCTTCTGCTGATGGATCAAATTTCTTGCTGCAGCAAAGTCCTC CTTTTTCAAGTCCTCTATTTGACCCTTCATTCTCATGGCCTGCTTTAGAAACCAATGAGCCAACCCATGTTGAGGATCAA CATGAATCACAAGAAGCTCCTCTTGGCAACACCCAATTAGTGAGCCAGAGCCAGAACATGGTTAATGTTGTTGATGGTAG GTATAATAATCAGTCTGAAACTGAAACTCATTCAGTTGTAGAAGGTACTTCTGATGGGGTTAAGAGGTGGTGGATTGCAC CTACATGTAGTCCTGGACTTGGACCTTCCATAATGGAGAAGCTGATAAGGGCCCTGAAATGGATCAAACAATTCAATTGG AACAAAGACATGCTCATACAAATTTGGGTGCCAGTTCCTCGAGGTGATAGGCCTATTCTATCAGCTAACAATCTTCCATT TTCACTTGATTCTGGGTCTGAAAACCTTGCAAGGTACCGAGAAATCTCTGAGGGGTTTCAGTTTTCAGCAGAGGAGGACT CCAAGGAGTTGGTGCCGGGATTGCCGGGTCGAGTTTTCCGGGACAAGGTTCCTGAGTGGACTCCTGATGTGAGGTTCTTC AGGAGTGATGAGTACCCGCGTGTCGAACATGCTCGAGAGTTTGACATATGTGGAACATTAGCAGTGCCAATCTTTGAGCA AGGTAGCAGGACTTGCTTGGGTGTTATTGAGGTTGTGATGACTACACAGCAGATCAATTATGTCCCTCAACTTGAGAGTG TTTGCAAGGCACTTGAGGTTGTTGATCTTACAAGCTTGAAACATTCAAGTATTCAGAATGCAAAGCAGGCACGTGACAAG TCGTATGAAGCTGCACTACCCGAGATTCAAGAGGTGCTGAGATCTGCATGTCATATGCACAAATTACCTTTAGCTCAAAC TTGGGTCTCGTGCTTTCAACAAGGCAAAGATGGGTGCCGGCATTCTGAAGATAATTACTTACACTGCATATCTCCTGTGG AGCAAGCTTGCTATGTTGGTGATCCCTCTGTTAGGTTCTTTCATGAGGCTTGCATGGAGCATCACTTGTTAAAAGGTCAA GGTGTTGCTGGGAAAGCTTTCATGATAAATCAACCATTCTTCTCAACCGACATAACTATGTTAAGCAAGACAGACTATCC ACTGTCTCATCATGCCAGATTGTTCGGATTGCGCGCTGCAGTTGCCATACGCCTCCGAAGCATCTATAGTAGTGCAGATG ACTATGTTCTAGAGTTCTTCTTGCCTGTGAATTGCAATGACAGTGAAGAACAGAAAAACATGCTTATATCATTGTCCATA ATTATACAAAGGTGTTGCCGCAGCTTGCGGGTTATAACAGATAAGGAATTGGAGAGAACTAGCTCATCAGTTGAAGTGAT GGCCCTTGAAGATAGTGGATTTGCTAGGACTGTGAAATGGTCAGAACCCCAACACATAACAAGTGTTGCCTCATTGGAAC CTGAAGAAAAATCAAGTGAAACAGTGGGTGGAAAATTCTCTGATCTAAGGGAACATCAAGAAGATTCTATTTTAAAAGGA AACATTGAGTGTGATAGGGAGTGTTCTCCTTTTGTTGAAGGTAACTTATCAAGTGTGGGAATAAGTAAAACCGGAGAGAA AAGGCGAGCCAAAGCAGATAAAACTATCACTCTGGAAGTTCTTAGGCAATATTTTCCTGGAAGCCTAAAAGATGCTGCAA AGAATATTGGTGTTTGTACTACAACTTTGAAAAGGGTATGCCGACAACATGGGATAAAGCGTTGGCCTTCTAGAAAGATC AAGAAGGTTGGTCACTCCTTACAGAAACTCCAACTTGTCATTGACTCAGTTCAAGGTGCCTCTGGTGCATCATTTAAAAT TGATTCCTTCTATTCGAACTTCCCGGATCTAGCTTCTCCAAATTTATCAGGAGCCAGCCTGGTCTCAGCTCTGAATCAAA GTGAAAATCCAAACTCATTAAGCATACAACCTGATCTTGGCCCGTTGAGCCCAGAAGGTGCAACCAAATCACTCTCTTCC TCATGCAGCCAGGGTTCCCTTTCAAGCCATTCCTGTTCCAGCATGCCAGAGCAACAACCTCACACAAGTGATGTTGCTTG TAACAAAGATCCTGTGGTTGGTAAAGACTCTGCTGATGTTGTGTTGAAGAGGATCAGAAGTGAAGCAGAGCTTAAAAGCC ACAGTGAAAATAAAGCAAAACTCTTCCCCAGATCTCTAAGCCAGGAAACACTTGGTGAACACACTAAAACCGAGTATCAA AGTTACTTATTAAAAACCTGTCACAAAGCAACTCCAAAGGAGGATGCTCACAGAGTAAAAGTTACATATGGAGATGAAAA AACCCGGTTTCGGATGCCAAAGAGTTGGAGCTATGAACATCTTTTGCAGGAAATTGCTAGGAGATTTAATGTGAGTGATA TGAGCAAATTTGATGTTAAATATTTGGATGATGACTTAGAATGGGTATTACTAACTTGTGATGCTGATTTAGAGGAGTGC ATTGATGTTTGTCTATCTTCTGAGAGTAGTACCATTAAACTTTGCATACAAGCTTCTAGTGGTATGAGAAGTTAA
Protein sequence (LotjaGi1g1v0436300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDGAVTTTSAAMMEAPTNETSMDFEYMSDLLLDGCWLEASADGSNFLLQQSPPFSSPLFDPSFSWPALETNEPTHVEDQ HESQEAPLGNTQLVSQSQNMVNVVDGRYNNQSETETHSVVEGTSDGVKRWWIAPTCSPGLGPSIMEKLIRALKWIKQFNW NKDMLIQIWVPVPRGDRPILSANNLPFSLDSGSENLARYREISEGFQFSAEEDSKELVPGLPGRVFRDKVPEWTPDVRFF RSDEYPRVEHAREFDICGTLAVPIFEQGSRTCLGVIEVVMTTQQINYVPQLESVCKALEVVDLTSLKHSSIQNAKQARDK SYEAALPEIQEVLRSACHMHKLPLAQTWVSCFQQGKDGCRHSEDNYLHCISPVEQACYVGDPSVRFFHEACMEHHLLKGQ GVAGKAFMINQPFFSTDITMLSKTDYPLSHHARLFGLRAAVAIRLRSIYSSADDYVLEFFLPVNCNDSEEQKNMLISLSI IIQRCCRSLRVITDKELERTSSSVEVMALEDSGFARTVKWSEPQHITSVASLEPEEKSSETVGGKFSDLREHQEDSILKG NIECDRECSPFVEGNLSSVGISKTGEKRRAKADKTITLEVLRQYFPGSLKDAAKNIGVCTTTLKRVCRQHGIKRWPSRKI KKVGHSLQKLQLVIDSVQGASGASFKIDSFYSNFPDLASPNLSGASLVSALNQSENPNSLSIQPDLGPLSPEGATKSLSS SCSQGSLSSHSCSSMPEQQPHTSDVACNKDPVVGKDSADVVLKRIRSEAELKSHSENKAKLFPRSLSQETLGEHTKTEYQ SYLLKTCHKATPKEDAHRVKVTYGDEKTRFRMPKSWSYEHLLQEIARRFNVSDMSKFDVKYLDDDLEWVLLTCDADLEEC IDVCLSSESSTIKLCIQASSGMRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 900 | 883 | 0.0 | – | |
| PANTHER | 18 | 900 | 883 | 0.0 | – | |
| ProSiteProfiles | 582 | 663 | 82 | 18.167 | ||
| Pfam | 595 | 643 | 49 | 2.5E-24 | ||
| MobiDBLite | 696 | 750 | 55 | - | – | |
| MobiDBLite | 713 | 745 | 33 | - | – | |
| SUPERFAMILY | 809 | 901 | 93 | 5.64E-24 | – | |
| Gene3D | 813 | 900 | 88 | 3.8E-14 | – | |
| ProSiteProfiles | 816 | 899 | 84 | 25.41 | ||
| SMART | 816 | 899 | 84 | 1.1E-23 | ||
| Pfam | 817 | 897 | 81 | 1.6E-18 | ||
| CDD | 817 | 898 | 82 | 2.11446E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0436300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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