Domain Predictions — View

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cd16938

Source: CDD

Description

HATPase_ETR2_ERS2-EIN4-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0786100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor; TAIR: AT3G04580.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q9ZTP3\|EIN4_ARATH Protein EIN4; TrEMBL-Plants: tr\|G7L2X0\|G7L2X0_MEDTR Ethylene receptor; Found in the gene: LotjaGi1g1v0786100	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR014525 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF00512 PF01590 PIRSF026389 PS50109 PS50110 PTHR43719 PTHR43719:SF36 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	40
LotjaGi1g1v0786100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor; TAIR: AT3G04580.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q9ZTP3\|EIN4_ARATH Protein EIN4; TrEMBL-Plants: tr\|G7L2X0\|G7L2X0_MEDTR Ethylene receptor; Found in the gene: LotjaGi1g1v0786100	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR014525 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF00512 PF01590 PIRSF026389 PS50109 PS50110 PTHR43719 PTHR43719:SF36 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	40
LotjaGi1g1v0786100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor; TAIR: AT3G04580.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q9ZTP3\|EIN4_ARATH Protein EIN4; TrEMBL-Plants: tr\|G7L2X0\|G7L2X0_MEDTR Ethylene receptor; Found in the gene: LotjaGi1g1v0786100	Domains Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF00512 PF01590 PS50109 PS50110 PTHR43719 PTHR43719:SF36 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SignalP-TM TMhelix cd00082 cd00156 cd16938	36
LotjaGi5g1v0182400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor; TAIR: AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q0WPQ2\|ETR2_ARATH Ethylene receptor 2; TrEMBL-Plants: tr\|A0A1J7GKM4\|A0A1J7GKM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0182400	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR011006 IPR014525 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF01590 PIRSF026389 PS50110 PTHR24423 PTHR24423:SF616 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SSF55874 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	38
LotjaGi5g1v0182400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor; TAIR: AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q0WPQ2\|ETR2_ARATH Ethylene receptor 2; TrEMBL-Plants: tr\|A0A1J7GKM4\|A0A1J7GKM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0182400	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR011006 IPR014525 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF01590 PIRSF026389 PS50110 PTHR24423 PTHR24423:SF616 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SSF55874 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	38
LotjaGi5g1v0206300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor like-protein; TAIR: AT3G04580.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q9ZTP3\|EIN4_ARATH Protein EIN4; TrEMBL-Plants: tr\|A0A0B2Q4A5\|A0A0B2Q4A5_GLYSO Protein EIN4; Found in the gene: LotjaGi5g1v0206300	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR014525 IPR029016 IPR036097 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF00512 PF01590 PIRSF026389 PS50109 PS50110 PTHR43719 PTHR43719:SF40 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00388 SM00448 SSF47384 SSF52172 SSF55781 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	40
LotjaGi6g1v0007200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor family protein; TAIR: AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q0WPQ2\|ETR2_ARATH Ethylene receptor 2; TrEMBL-Plants: tr\|A0A1J7GKM4\|A0A1J7GKM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0007200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR014525 IPR029016 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF01590 PIRSF026389 PS50109 PS50110 PTHR24423 PTHR24423:SF616 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00448 SSF52172 SSF55781 SSF55874 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	37
LotjaGi6g1v0007200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene receptor family protein; TAIR: AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp\|Q0WPQ2\|ETR2_ARATH Ethylene receptor 2; TrEMBL-Plants: tr\|A0A1J7GKM4\|A0A1J7GKM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0007200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.130 G3DSA:3.30.450.40 G3DSA:3.30.565.10 G3DSA:3.40.50.2300 IPR001789 IPR003018 IPR003661 IPR005467 IPR011006 IPR014525 IPR029016 IPR036890 NON_CYTOPLASMIC_DOMAIN PF00072 PF01590 PIRSF026389 PS50109 PS50110 PTHR24423 PTHR24423:SF616 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00065 SM00448 SSF52172 SSF55781 SSF55874 SignalP-TM TMhelix TRANSMEMBRANE cd00082 cd00156 cd16938	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16938	CDD	1	12.50