Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0206300 |
| Transcript ID | LotjaGi5g1v0206300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ethylene receptor like-protein; TAIR: AT3G04580.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp|Q9ZTP3|EIN4_ARATH Protein EIN4; TrEMBL-Plants: tr|A0A0B2Q4A5|A0A0B2Q4A5_GLYSO Protein EIN4; Found in the gene: LotjaGi5g1v0206300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50864567..50868817) extracted from Lotus japonicus Gifu genome v1.2.
AGTACATGAAAATCTATTCATTCATCTAATTAAACTCTTTCCTAGTCATATCCTGAACAAGTACGAGGAAGCCACACTCA ACATTCATTATAAATCCATTCGGTCTGTTCAAACGTTGTCTTTTCCTCGGTCCCCATTGTCTTCTTCCCCCAACACACAC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACTTGGGTGAGGGTTGTTCATTTTGATCGATTGAGCTGAA TTTCACAGTCCAAGTTCAAAAACTTAGCTGAAACAAGTGTTGGGTTGGGAAGAAAGAAACCAAAGAACCATGGAAGATCA TAAAACTATTCAACATTAGCTTTTTGCTTGAGCAATCTCCATCAGGTGTCGATTTTAGCAGATTAGAATCAGGTTGGTGA AGCTTTCTGTCTTTTTCTGACTTTGAAGTTGGAACCATGATGATGATTATGAGAAGAACCCTCCTTGTTCTATTGTTTCT GCTTTCTACTCTTGTTCTCTCTGGTTCTCCTGAATTTGACCACTGCAACTGTGATGATGATGATGATGATGGAGGTTTTT GGAGCATACACAGCATCGTCATCGGCCAAAAGGTCAGTGACTTCTTCATCGCCATTGCATATTTCTCCATCCCCATTGAA ATCCTCTACTTCGTTAACCGCTCCAATGTCCCATTCAAATTGCTCTTCCTTCAATTCATGGCCTTCATAATCCTCTGTGG CCTCACCCATTTGCTCACTGCGTACTCTTCTCACGCGCCACCCTCTTTCCATTTGGTCCTCTCCCTCACCGTGGCTAAGT TCCTCACTGCTCTTGTCTCATGCGCCACCGCCTTAACCCTTCCACCTCTCATCCCTCTCCTTCTCAGAATCAAGGTCAGG GAGATTTTCCTGAAGCAGAATGTGATGGAGTTGGGTTTAGAAGTTGGGATGAGGAAGAAATTGAAGGAAGCTAGCTTGCA TGTTCGGATGCTCACTAGGGAAATCAGAAAATCTCTTGATAAACACACCATTTTGTACACCACCCTTGTTGAGCTTTCTA AGGCATTGGATTTGTATAATTGTGCAGTTTGGATGCCAAATGAGGAGAGGAGAGAAATGTACTTGACCTATGAGTTGAAA CCAAACAATGCTAAGAATTTTCAGAACTCTATTCCTATGAATGATCTAGATGTGTTGGAGATAAGAAAAACTAAATGGGT GAAGATTTTGAGGCATGACTCTGCATTAGGGGCTGCAAGCAGTGGTGGGTCAGGTTCTAGGTATTTTGGCGCTGTAGCGG CGGTTCGGATGCCGTTGCTTCATGTGTCGAATTTCAAAGGAGGGACGCCGGAGTTCGTTGAGACGTGTTATGCTATACTG GTTTTGGTTCTTCCAAGTTCAAATTCAAGGGTTTGGACTAATCAAGAGATAGGGATAGTTGAAGTGGTTGCTGATCAGGT GGCTGTGGCGTTATCTCATGCATCGGTTCTTGAAGAGTCTCAGCTGATGAGACAGAAACTCGAAGAGCAGAACCGCGCTT TGCAACAGTCTAGGCAAAATGCAATGATGGCCAGCCTGGCAAGGAAGTCATTTCAGACAGTGATGAGCCATGGATTGAGG AGGCCTATGCATTCAATTCTGGGGATGCTTTCATTGTTTCAGGAGGAGGATAATATCATGAGATCTGAACAGAAGATTAT TGGTGACACCATGTTGAAGGTTGGGAAAGTGCTCTCAAGTTTGATCAATGATGTGATGGAGATTTCGAAAAATGATAACA GAGGCCTCTGGTTGGAGATGAAACCTTTCCATCTGCATTCCATGTTGAAGGAAGCTGTTTGTGTTGCTAAGTGCTTGTGT GTGTATGAGGGTTTAGGTTTTGAAATTGATGTCCAGAGGGCGTTGCCTGAACAAGTAATAGGCGATGAGGCGCGGGTTTT TCAAGTGATTTTGCACATAATTGGGTATTTATTGAGCTTGCATGGAGGGAATCTCACTTTTCGAGTTTTTCTTGGAGGTG ATGATGGGGATAAGGATGATATAAGTTTTGGAATGTGGATGTCTAACCGTCAAATTCAGGATGTGTATATAAAATTTGAT TTTCAGATTGCTGGTTGTTCTCAGTCGGATGAATCAACTTCAACCAATCATTGTACTGGTAGGAGGCACTACAACAATGA ACCTGAGGAGGGCCTGAGCTTCAACATGTGCAAGAAGTTGGTACAGGTAAGTGCACCATTATCTTTATCTTAATCAATTT TTTTAATCACAATCTGCTTGATTGTAGTGAGAAGGATACAATTTCCATGTTACTTTTTAACCGTTACTGATAAAGCATAC CTCACCCCCTAGAGAAATTAAGAGTTCATCATTTAATTGTATAAAATGTTTGGATATTGGTTGACACTTCAAACGGATGC TAGCATTCACCTCGAGACAAAAAAATGAACGAGAATCTTCTTATGAATTTGGATAAAAGTCCATTCACGTTGCACTCAAG TGGTATCCAAGCACACACTATGTTGTTTCTAGGACCAATATGCATGCTGGCGTGGCTGCGTGCATATTAAAGAGATACAA GTTTGGTTTGAAAATTTACTCTCCTGCTATCATATACCTCATGTAGCTTTAATGGGGGAAAGACTGGATATATGTTGATT CCCACTTCTAACATCTGCTAGTTTCCCCTACGTTGGAAGGATCCTTTTTGGTAGCTTATCCTGCCTGGGTGAAAATACAG ATTATAACATAACAGGCATCATTTAAAAGCAAAATAAATGGTGTATTGTGTCATGTTATTATTATTTTATTTCATTTTGA ATGGCATGATCATCCATTTAGCTTTAGAATTCCAGCATGTACTAGACTAGAAAAAGTTGTCACTTCCTTTCATCAGTTGG GCTAGGTGAATCATAAGAACTTTCATGCATTTTGGGGTTAGGGGCGTGTATAGAAAGCAAAATGGCAAAGTGGCAGGCCT TAGGAATCTTGTAATGTAGCTTACTTTTTCATGCACTAAAGATTTACTATAACACTCAATTGCAGCACACAATTCTTCTA TTAAAGCATTATAACTTCTCTCTATTAAGCCCCAAACCAAATATTTTGTTCCGCCCCAAACCAAATATTTTGTTCCGCCC CTTCCTATAGCATGTTTGTATGATTGTTTTGTGCAATTCTGACTTTGAAATATGTAACAATGTGCAGATAATGCAAGGTA ATATATGGATATCAACCTCTCAGGGTTTAGTGCAAGGCATGACCCTTCTTCTGAAATTCCAGAAAGGACCATCGCTTGTA AAATCCATGTATGCACCCAAAGACTCTTCAAACTCACAGTTCAGAGGCCTTAAGGTTCTGCTAGCCGATGATGACGGTGT GAACCGGGGCGTGACGAAGAAGTTACTTGAGAAGCTGGGTTGCCAAGTAACTGCAGTTTCATCAGGGTTTGAGTGCCTGA GCGCCGTAAGAGGCTCCGGAAACTCATTCAGGATCATACTGTTGGATCTTCACATGCCTGAAATGGACGGTTTTGAAGTG GCGGCGAGGATTCAGAACTTTAATAGGCCGAATTGGCCCTTGATTGTCGCCTTCATAGCAAGTGCAGAAGAGCATGTGAA GGAGAAGTGCCTGCTAGCGGGAATGAATGGGTTGATTCGGAAACCTATCATCCTTCATGAGATTGCAGATGAACTTAGAT CTGTCCTCCAACGTGCAGGTGAAAAACTTTAGAGAAAAAAGAACAGTTGCAAGTGCCTGAAATTTCTTGAGTTTTGCAAA ATGGCATAGAGATTAGAGTACTTGAGATTTCTTACAATAACAAATAATACACAATTTCAAGTAATAAAAACTGTTCACCT GATTTTGTTCATAATCACGGTTTAATGCGATTACAATCACCGCTGCAATGCGACTACAATCCCGGTCGCAATCGAGGTGT TACAACCGTGATTTGTTGTTGGGTTTTTGATTCATTCACAATTAGCGCAAACTAATTTTTATTCATTGAGCTTCGCATCG AATTATGAAATATGCAATTGAAATTAGACTTACGAAGAATATAAAATGTGACACAATTTTTTTATTTAATTAAAAAATAT AAGGGAAAAATCATGAAAAATGCTAGAATTTTTGTATTAAATAAAAAAATTACAACACATTTGTCTAAATATAAGAGGGA GTCTCCCAATACAAAAAAACCCCTACACTGTTTATGGTCCAACTAAGTCAATTTATCCACCAACGTGTTTCAACTTCTAG ATGCATGAATC
CDS sequence (LotjaGi5g1v0206300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGATTATGAGAAGAACCCTCCTTGTTCTATTGTTTCTGCTTTCTACTCTTGTTCTCTCTGGTTCTCCTGAATT TGACCACTGCAACTGTGATGATGATGATGATGATGGAGGTTTTTGGAGCATACACAGCATCGTCATCGGCCAAAAGGTCA GTGACTTCTTCATCGCCATTGCATATTTCTCCATCCCCATTGAAATCCTCTACTTCGTTAACCGCTCCAATGTCCCATTC AAATTGCTCTTCCTTCAATTCATGGCCTTCATAATCCTCTGTGGCCTCACCCATTTGCTCACTGCGTACTCTTCTCACGC GCCACCCTCTTTCCATTTGGTCCTCTCCCTCACCGTGGCTAAGTTCCTCACTGCTCTTGTCTCATGCGCCACCGCCTTAA CCCTTCCACCTCTCATCCCTCTCCTTCTCAGAATCAAGGTCAGGGAGATTTTCCTGAAGCAGAATGTGATGGAGTTGGGT TTAGAAGTTGGGATGAGGAAGAAATTGAAGGAAGCTAGCTTGCATGTTCGGATGCTCACTAGGGAAATCAGAAAATCTCT TGATAAACACACCATTTTGTACACCACCCTTGTTGAGCTTTCTAAGGCATTGGATTTGTATAATTGTGCAGTTTGGATGC CAAATGAGGAGAGGAGAGAAATGTACTTGACCTATGAGTTGAAACCAAACAATGCTAAGAATTTTCAGAACTCTATTCCT ATGAATGATCTAGATGTGTTGGAGATAAGAAAAACTAAATGGGTGAAGATTTTGAGGCATGACTCTGCATTAGGGGCTGC AAGCAGTGGTGGGTCAGGTTCTAGGTATTTTGGCGCTGTAGCGGCGGTTCGGATGCCGTTGCTTCATGTGTCGAATTTCA AAGGAGGGACGCCGGAGTTCGTTGAGACGTGTTATGCTATACTGGTTTTGGTTCTTCCAAGTTCAAATTCAAGGGTTTGG ACTAATCAAGAGATAGGGATAGTTGAAGTGGTTGCTGATCAGGTGGCTGTGGCGTTATCTCATGCATCGGTTCTTGAAGA GTCTCAGCTGATGAGACAGAAACTCGAAGAGCAGAACCGCGCTTTGCAACAGTCTAGGCAAAATGCAATGATGGCCAGCC TGGCAAGGAAGTCATTTCAGACAGTGATGAGCCATGGATTGAGGAGGCCTATGCATTCAATTCTGGGGATGCTTTCATTG TTTCAGGAGGAGGATAATATCATGAGATCTGAACAGAAGATTATTGGTGACACCATGTTGAAGGTTGGGAAAGTGCTCTC AAGTTTGATCAATGATGTGATGGAGATTTCGAAAAATGATAACAGAGGCCTCTGGTTGGAGATGAAACCTTTCCATCTGC ATTCCATGTTGAAGGAAGCTGTTTGTGTTGCTAAGTGCTTGTGTGTGTATGAGGGTTTAGGTTTTGAAATTGATGTCCAG AGGGCGTTGCCTGAACAAGTAATAGGCGATGAGGCGCGGGTTTTTCAAGTGATTTTGCACATAATTGGGTATTTATTGAG CTTGCATGGAGGGAATCTCACTTTTCGAGTTTTTCTTGGAGGTGATGATGGGGATAAGGATGATATAAGTTTTGGAATGT GGATGTCTAACCGTCAAATTCAGGATGTGTATATAAAATTTGATTTTCAGATTGCTGGTTGTTCTCAGTCGGATGAATCA ACTTCAACCAATCATTGTACTGGTAGGAGGCACTACAACAATGAACCTGAGGAGGGCCTGAGCTTCAACATGTGCAAGAA GTTGGTACAGATAATGCAAGGTAATATATGGATATCAACCTCTCAGGGTTTAGTGCAAGGCATGACCCTTCTTCTGAAAT TCCAGAAAGGACCATCGCTTGTAAAATCCATGTATGCACCCAAAGACTCTTCAAACTCACAGTTCAGAGGCCTTAAGGTT CTGCTAGCCGATGATGACGGTGTGAACCGGGGCGTGACGAAGAAGTTACTTGAGAAGCTGGGTTGCCAAGTAACTGCAGT TTCATCAGGGTTTGAGTGCCTGAGCGCCGTAAGAGGCTCCGGAAACTCATTCAGGATCATACTGTTGGATCTTCACATGC CTGAAATGGACGGTTTTGAAGTGGCGGCGAGGATTCAGAACTTTAATAGGCCGAATTGGCCCTTGATTGTCGCCTTCATA GCAAGTGCAGAAGAGCATGTGAAGGAGAAGTGCCTGCTAGCGGGAATGAATGGGTTGATTCGGAAACCTATCATCCTTCA TGAGATTGCAGATGAACTTAGATCTGTCCTCCAACGTGCAGGTGAAAAACTTTAG
Protein sequence (LotjaGi5g1v0206300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMIMRRTLLVLLFLLSTLVLSGSPEFDHCNCDDDDDDGGFWSIHSIVIGQKVSDFFIAIAYFSIPIEILYFVNRSNVPF KLLFLQFMAFIILCGLTHLLTAYSSHAPPSFHLVLSLTVAKFLTALVSCATALTLPPLIPLLLRIKVREIFLKQNVMELG LEVGMRKKLKEASLHVRMLTREIRKSLDKHTILYTTLVELSKALDLYNCAVWMPNEERREMYLTYELKPNNAKNFQNSIP MNDLDVLEIRKTKWVKILRHDSALGAASSGGSGSRYFGAVAAVRMPLLHVSNFKGGTPEFVETCYAILVLVLPSSNSRVW TNQEIGIVEVVADQVAVALSHASVLEESQLMRQKLEEQNRALQQSRQNAMMASLARKSFQTVMSHGLRRPMHSILGMLSL FQEEDNIMRSEQKIIGDTMLKVGKVLSSLINDVMEISKNDNRGLWLEMKPFHLHSMLKEAVCVAKCLCVYEGLGFEIDVQ RALPEQVIGDEARVFQVILHIIGYLLSLHGGNLTFRVFLGGDDGDKDDISFGMWMSNRQIQDVYIKFDFQIAGCSQSDES TSTNHCTGRRHYNNEPEEGLSFNMCKKLVQIMQGNIWISTSQGLVQGMTLLLKFQKGPSLVKSMYAPKDSSNSQFRGLKV LLADDDGVNRGVTKKLLEKLGCQVTAVSSGFECLSAVRGSGNSFRIILLDLHMPEMDGFEVAARIQNFNRPNWPLIVAFI ASAEEHVKEKCLLAGMNGLIRKPIILHEIADELRSVLQRAGEKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PIRSF | 3 | 764 | 762 | 0.0 | ||
| PANTHER | 8 | 759 | 752 | 0.0 | – | |
| PANTHER | 8 | 759 | 752 | 0.0 | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 32 | 12 | - | – | |
| Phobius | 33 | 55 | 23 | - | – | |
| TMHMM | 56 | 73 | 18 | - | – | |
| Phobius | 56 | 73 | 18 | - | – | |
| Phobius | 74 | 81 | 8 | - | – | |
| Phobius | 82 | 102 | 21 | - | – | |
| TMHMM | 83 | 100 | 18 | - | – | |
| Phobius | 103 | 121 | 19 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 122 | 143 | 22 | - | – | |
| Phobius | 144 | 764 | 621 | - | – | |
| Gene3D | 175 | 342 | 168 | 3.6E-8 | ||
| SMART | 188 | 349 | 162 | 0.0074 | ||
| Pfam | 190 | 339 | 150 | 9.8E-9 | ||
| SUPERFAMILY | 191 | 342 | 152 | 6.54E-12 | – | |
| Gene3D | 343 | 440 | 98 | 2.3E-15 | – | |
| Coils | 345 | 372 | 28 | - | – | |
| SUPERFAMILY | 360 | 441 | 82 | 1.9E-8 | ||
| SMART | 375 | 442 | 68 | 7.4E-7 | ||
| CDD | 375 | 438 | 64 | 3.94348E-8 | ||
| Pfam | 377 | 441 | 65 | 1.9E-6 | ||
| ProSiteProfiles | 382 | 618 | 237 | 16.362 | ||
| Gene3D | 444 | 616 | 173 | 6.3E-8 | ||
| CDD | 483 | 612 | 130 | 1.13343E-40 | – | |
| Gene3D | 622 | 760 | 139 | 1.1E-31 | – | |
| SUPERFAMILY | 634 | 759 | 126 | 2.7E-30 | ||
| SMART | 638 | 753 | 116 | 6.6E-23 | ||
| ProSiteProfiles | 639 | 757 | 119 | 35.397 | ||
| Pfam | 640 | 752 | 113 | 9.9E-18 | ||
| CDD | 641 | 757 | 117 | 2.16915E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphorelay sensor kinase activity | Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response. | ||
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Biological process | Response to ethylene | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus. | ||
| Molecular function | Ethylene receptor activity | Combining with ethylene and transmitting the signal in the cell to initiate a change in cell activity. | ||
| Molecular function | Ethylene binding | Interacting selectively and non-covalently with ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator. |
Expression pattern of LotjaGi5g1v0206300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…