Domain Predictions — View

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cd17876

Source: CDD

Description

SRalpha_C

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0288400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp\|Q9DBG7\|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr\|G7JGN9\|G7JGN9_MEDTR Signal recognition particle receptor protein, putative; Found in the gene: LotjaGi4g1v0288400	Domains G3DSA:1.20.120.140 G3DSA:3.30.450.60 G3DSA:3.40.50.300 IPR000897 IPR003593 IPR007222 IPR011012 IPR013822 IPR027417 IPR036225 IPR042101 NON_CYTOPLASMIC_DOMAIN PF00448 PF02881 PF04086 PS00300 PTHR43134 PTHR43134:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SM00962 SM00963 SSF47364 SSF52540 SSF64356 cd14826 cd17876 mobidb-lite	31
LotjaGi4g1v0288400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp\|Q9DBG7\|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr\|G7JGN9\|G7JGN9_MEDTR Signal recognition particle receptor protein, putative; Found in the gene: LotjaGi4g1v0288400	Domains G3DSA:1.20.120.140 G3DSA:3.30.450.60 G3DSA:3.40.50.300 IPR000897 IPR003593 IPR007222 IPR011012 IPR013822 IPR027417 IPR036225 IPR042101 NON_CYTOPLASMIC_DOMAIN PF00448 PF02881 PF04086 PS00300 PTHR43134 PTHR43134:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SM00962 SSF47364 SSF52540 SSF64356 cd14826 cd17876 mobidb-lite	30
LotjaGi6g1v0202600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp\|Q9DBG7\|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr\|A0A1J7GDN0\|A0A1J7GDN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0202600	Domains G3DSA:1.20.120.140 G3DSA:3.30.450.60 G3DSA:3.40.50.300 IPR000897 IPR003593 IPR007222 IPR011012 IPR013822 IPR027417 IPR036225 IPR042101 PF00448 PF02881 PF04086 PS00300 PTHR43134 PTHR43134:SF6 SM00382 SM00962 SM00963 SSF47364 SSF52540 SSF64356 cd14826 cd17876 mobidb-lite	26
LotjaGi6g1v0202600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp\|Q9DBG7\|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr\|A0A1J7GDN0\|A0A1J7GDN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0202600	Domains G3DSA:1.20.120.140 G3DSA:3.30.450.60 G3DSA:3.40.50.300 IPR000897 IPR003593 IPR007222 IPR011012 IPR013822 IPR027417 IPR036225 IPR042101 PF00448 PF02881 PF04086 PS00300 PTHR43134 PTHR43134:SF6 SM00382 SM00962 SM00963 SSF47364 SSF52540 SSF64356 cd14826 cd17876 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00