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SSF47364

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of
GO:0006614
Biological process SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
Subterm of

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
Lj0g3v0131509.2
– PREDICTED: cell division protein ftsY homolog [Glycine max] gi|356504906|ref|XP_003521235.1|
Domains
18
Lj3g3v0044270.1
– Signal recognition particle, SRP54 subunit protein [Theobroma cacao] gi|508778637|gb|EOY25893.1|
Domains
24
Lj4g3v0510210.1
– Signal recognition particle, SRP54 subunit protein [Theobroma cacao] gi|508778637|gb|EOY25893.1|
Domains
24
Lj4g3v1983620.1
– Signal recognition particle receptor subunit alpha [Medicago truncatula] gi|357480047|ref|XP_003610309.1|
Domains
26
Lj6g3v1077660.1
– PREDICTED: signal recognition particle receptor subunit alpha-like [Glycine max] gi|356517002|ref|XP_003527179.1|
Domains
20
LotjaGi3g1v0007800.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi3g1v0007800
Domains
27
LotjaGi3g1v0007800.2
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.3
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.4
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.5
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0007800.6
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi3g1v0007800
Domains
27
LotjaGi3g1v0007800.7
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A067KLN9|A0A067KLN9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0007800
Domains
28
LotjaGi3g1v0355000.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A0D2UQY3|A0A0D2UQY3_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
27
LotjaGi3g1v0355000.2
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|I1KVG2|I1KVG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
28
LotjaGi3g1v0355000.3
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|I1KVG2|I1KVG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
28
LotjaGi3g1v0355000.4
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A0D2UQY3|A0A0D2UQY3_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355000
Domains
27
LotjaGi3g1v0377700.1
– Signal recognition particle protein; TAIR: AT2G45770.1 signal recognition particle receptor protein, chloroplast (FTSY); Swiss-Prot: sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic; TrEMBL-Plants: tr|I1JKD2|I1JKD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0377700
Domains
21
LotjaGi3g1v0377700.2
– Signal recognition particle protein; TAIR: AT2G45770.1 signal recognition particle receptor protein, chloroplast (FTSY); Swiss-Prot: sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic; TrEMBL-Plants: tr|I1JKD2|I1JKD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0377700
Domains
21
LotjaGi3g1v0377700.3
– Signal recognition particle protein; TAIR: AT2G45770.1 signal recognition particle receptor protein, chloroplast (FTSY); Swiss-Prot: sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic; TrEMBL-Plants: tr|I1JKD2|I1JKD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0377700
Domains
21
LotjaGi4g1v0068100.1
– Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi4g1v0068100
Domains
28
LotjaGi4g1v0288400.1
– Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp|Q9DBG7|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr|G7JGN9|G7JGN9_MEDTR Signal recognition particle receptor protein, putative; Found in the gene: LotjaGi4g1v0288400
Domains
31
LotjaGi4g1v0288400.2
– Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp|Q9DBG7|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr|G7JGN9|G7JGN9_MEDTR Signal recognition particle receptor protein, putative; Found in the gene: LotjaGi4g1v0288400
Domains
30
LotjaGi6g1v0202600.1
– Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp|Q9DBG7|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr|A0A1J7GDN0|A0A1J7GDN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0202600
Domains
26
LotjaGi6g1v0202600.2
– Signal recognition particle protein; TAIR: AT4G30600.1 signal recognition particle receptor alpha subunit family protein; Swiss-Prot: sp|Q9DBG7|SRPRA_MOUSE Signal recognition particle receptor subunit alpha; TrEMBL-Plants: tr|A0A1J7GDN0|A0A1J7GDN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0202600
Domains
26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.17