Domain Predictions — View

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cd17978

Source: CDD

Description

DEXHc_DHX33

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0718000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp\|F4IE66\|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr\|K7K7U5\|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000	Domains G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011709 IPR014001 IPR027417 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF85 SM00487 SM00490 SM00847 SSF52540 cd17978 cd18791 mobidb-lite	23
LotjaGi1g1v0718000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp\|F4IE66\|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr\|K7K7U5\|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000	Domains G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011709 IPR014001 IPR027417 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF85 SM00490 SM00847 SSF52540 cd17978 cd18791	21
LotjaGi1g1v0718000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase, putative; TAIR: AT1G26370.1 RNA helicase family protein; Swiss-Prot: sp\|F4IE66\|PRP22_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; TrEMBL-Plants: tr\|K7K7U5\|K7K7U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0718000	Domains G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011709 IPR014001 IPR027417 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF85 SM00490 SM00847 SSF52540 cd17978 cd18791	21
LotjaGi4g1v0363900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp\|Q93Y16\|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr\|K7KQA5\|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900	Domains G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR007502 IPR011545 IPR014001 IPR027417 PF00270 PF00271 PF04408 PS51192 PS51194 PTHR18934 PTHR18934:SF131 SM00487 SM00490 SM00847 SSF52540 cd17978 cd18791	20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd18791	CDD	1	25.00