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GO:0000290

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Deadenylation-dependent decapping of nuclear-transcribed mRNA
Full defintion Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length.
Subterm of

Relationships

The relationship of GO:0000290 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0000290, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCkrc

Associated Lotus transcripts 7

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj1g3v4719680.1
– PREDICTED: mRNA-decapping enzyme-like protein-like isoform X1 [Cicer arietinum] gi|502111997|ref|XP_004494216.1|
GO terms
3
Lj3g3v1204530.1
– MRNA-decapping enzyme-like protein [Medicago truncatula] gi|357453179|ref|XP_003596866.1|
GO terms
3
Lj3g3v1204540.1
– PREDICTED: mRNA-decapping enzyme-like protein-like [Cicer arietinum] gi|502083501|ref|XP_004487479.1|
GO terms
3
LotjaGi1g1v0733900.1
– MRNA-decapping enzyme-like protein; TAIR: AT1G08370.1 decapping 1; Swiss-Prot: sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein; TrEMBL-Plants: tr|A0A151S1B1|A0A151S1B1_CAJCA mRNA-decapping enzyme-like protein; Found in the gene: LotjaGi1g1v0733900
GO terms
3
LotjaGi3g1v0034800.1
– Protein PAT1 like 1; TAIR: AT1G79090.1 topoisomerase II-associated protein; Swiss-Prot: sp|A2RRV3|PATL1_DANRE Protein PAT1 homolog 1; TrEMBL-Plants: tr|K7MCV2|K7MCV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0034800
GO terms
1
LotjaGi3g1v0140100.1
– Protein PAT1 like 1; TAIR: AT1G79090.1 topoisomerase II-associated protein; Swiss-Prot: sp|Q32N92|PATL1_XENLA Protein PAT1 homolog 1; TrEMBL-Plants: tr|A0A0L9UIL9|A0A0L9UIL9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0140100
GO terms
1
LotjaGi3g1v0180000.1
– MRNA-decapping enzyme-like protein; TAIR: AT1G08370.1 decapping 1; Swiss-Prot: sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein; TrEMBL-Plants: tr|A0A1J7I5L7|A0A1J7I5L7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0180000
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0043085
Biological process Positive regulation of catalytic activity 1 14.29