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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0180000 |
| Transcript ID | LotjaGi3g1v0180000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | mRNA-decapping enzyme-like protein; TAIR: AT1G08370.1 decapping 1; Swiss-Prot: sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein; TrEMBL-Plants: tr|A0A1J7I5L7|A0A1J7I5L7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0180000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25051850..25060075) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAAAATGTGACACGCATGCTTAAATACAGTACGGAATTTTAAGTCCCGTATTCAATAGGGAGAATACGAAATTTTAA ATTCCGTATTTGATAAAGTGGGGTGCCAAGCCCCATAGGTGGGGTGCCAAACCCAACTCCCCGAAGAAGCTGAGTCTGAT CGACTCAACCTGGTTCACCTGCATCGCACTGCGTTGCGCTCTCTCTACGCTTGAGATTTCAGAGAGAGAGAGAGAGAGAG AACCCTAACCTAATCCCCAAATCCCCAAAATTCTAGGGTTCATCTTGCAGATTGAGATTGAGCGAAAATGTCTCAGAACG GGAAATTGATGCCGAATCTAGACCAGCAAAGCACCAAGGTTCTCAACCTCACTGTTCTCCAACGAATCGACGCTTTCGTT GAGGAAATTCTCATCACCGCCGCACATGTCACCTTCTACGAGTTCAACATCGACCAAAGCCAATGGGTTCGCTTCTCTCA ATTTTCCATTTTCCCCATTTCTCTCTCTACTTTGTTTCTCTCTCTAACACGCACACACCCTCTGTTTTCTCTGTGATTGC ATTTCAGAGTCGCAAGGACGTTGAAGGATCGCTCTTTGTTGTTAAGAGGTTCGTTTCATTTTCTTCTTTTGAATATGTCA CGCGATTCATGATTGGAAATTTATTTTCAAGTGAGGTTAACTCTGGTTTTTTTTATGGTTTTGTGTAATTTCAGGACTTC AAAACCGAGATTTCAGTTTATTGTGATGAACCGTCGCAATACCGGTTAGTCGGTCCATATGCTTGTTTGTGCTGTTGTTG TTTTTTTCCTAAAAAGATAGAAATGGGAAAAAGCTATGCTTTTTGTTTGGAATTAGGCGTAATATAGTAAATGCACAACT GGTCTTCAATGATAATATTAATCTGTGTCAATTGGTTATGTGATCTTTTGATTTGATTTTGGAAACTCGTCAATTTGCTT CCAAGTATTTGCCTCAATCTGTCTGTAAACTAGTCTACAGGCATGCTAGAATTGAATGCTACTTTCTAAGTTGATATGTT GGCCTCCCATTCACTTGAAAAAGCTCAACAACTCTCTTGCCTTGATTGTTTGAAATTTTAATTTTCTGATTTTTTAACAG ATTCTTTTCTAATACTAATATATTAAGTCTGTTGGCTATTCCTCTATGTATGCCTGTGTTTCGAGATATTATATTTTTAG CTAATAGGTAGGTCATAGGAGTGGTTTTATTCTTAAAGTTATAGGATTGGGGATTGGGCATGGCTATCAGCATTCCACAC AAAGCCATTTCTTTTCTCCCTGCATCACAGTGCTTTTGTGGCTGATGCAGGTGCTATCATGTGAAGTCACAACATTTTGC GAGGACTGTAGTAGCTATTTTTGAAATCCTTTAAAAAACTAATTTGTCCTTTTAGCAGAGTGATTTTCAGGAAATTTTTT TGGTTTTCATTTGGTTTGTTTTAGAGAAAGTGACCCTAAAAGGGCTTGGACTGTCTCAATATGTTTCCCTCACTTACCTT TCCAGCCATCAGCTCTGCACTTTCAGGCCAAGTCCTCTGTGCTTTCAATTTTCATGCCCTCTGTTTCACGAGTTTCTGAT TGGTTTCTCTCGTATGGCTCTTAGTTCTGATTCTGACCTCATTCCTTTCTTCCCTTGTCCTCATTCCTCACAGGCTTAAA CATACTGTGTGTTTAGCTTTATATATTTTACTTGATTGTTACTTATGCATCTGTCTTCAATTTTGACTATTTTTTATTTT TATTTTGAGCAGCTATACATCTTCAGTATTAATTATTTAACCTATAACTAACATTTCAGTATAGCAGTCATCATGCTATG TGCTAACCTGCTTAAGCATTTTTGGGGCTTGGTTTCACACGCTGGCTGCTATATATACTATGAATAAAATGCGTACCCTG TAAACATGTATTTTAAACCTTTTTTTAAACGATGAAATAGATACTTGCTGCTACTCGACATGATAGTGCAGAACTGCATA GTGTACATGCATGTAACTTGCATTTAACCTCTGTCCATGTTGGCGTAAGCAGAAAATTTGGTGGAGAATCTCCTGGAGGA TTTCGAGTATGAAGTTCAGGTTCCGTATCTCCTGTATAGAAATGCAGCTCAAGAAGTGAATGGCATCTGGTTCTATAATC CACGTGAATGTGAAGAGGTTGCAAATCTTTTTAGCAGGTATTGCTTTTCTTACAGATTGAATCATGGAAATACTAAAATT CAGTTTTTGGCGAATTTTGCGGTGTTTCTGAATAATGAAGGGAGGTCATGCTTGACTTATCTTACTTTTTTAATGTTAAA AATTGCTTGTAATAAAAAAAACATGAGCAATTTTTTACTCTAGTTTAAGCAGATCCGGATATGTTTGTAAAGTGTACATG CTAGTAAAGTGTATAGTTTCAAACTCGTTTAGGATTGTAAAATTAGTGAACAAAGTTGATATCAGAAATCATTTCCTGGA GTTGGAGAGTAAATTTCCCTTATCCTTTTGAAATTCAAACACTGATGCACCTATTAGGATAATAGGATTTGAATTTGTTT TCTCTCCCTCTGCCAGTTCTTAATGGATGTCTAGTTCCACCTGACTGGGTTACTGACTGAAATATGTTGTTTTGTATGAC AGTTGGGTTCAATAGTCCAGCATTAGTTAAAGGAATCCTGAAATTAGTTTATGGTATGTCAAATATGACATATAAGATGT GCGCAATAATTAGTTTTGTTCTGTTTATAATTTGCACCTCCATTTCAAACCTTTTGCAGTTTGCACATTATCATGGATTT TAGTTGTATCCTAATTTTATATAATCTTTTAACATTTTCCGATACCTTAACATTTAAGTAAGGGTATCTCTTACTAGAGA ATGGAAAAAACTTGCAATGATAGATGATAGTCTATTATGGATGATTTTCTTTATAAAAATTAAAGCATTTTTTTTTTGCA CACATGCAAAAAGATTGGAAACCAAAGTTAATTACAACTATTTCCCAGTAATGTGTCTAAGAAACTGCAGATGTTATTGT TACCTGTGGATAGGAAGGTTGTAAAGAAAAAAGGAAATTATTATGCACATTACATGTTTTTATGTTGCTGATGATAGCAT GGATCTAGATTTATTTGGAATTAATTAGATCATCTTGAACTCCCATGACACATGTACGCGCACATTATTCACTTATATTT TTCTGATACTCAGGATCCTTAATACATTTGCCAAGGTGCCTCCAAAGTCAAAGTTATCCTCTACAAAGAGGTAATAATAT GCTTCTACCTTGTTAAGAACATTTGTGCCAGCACCTGCTTGCTCCCATGAGTGGTGGGGCTGGTTTAATCTTTAGTATTC TTTTTTTTTCAATCCCATTTCATTCAACTCTCTTTTACACATTCATATTTATGTACCTGACAAATGCAAGGTGTTTAAAG TGATGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAAACACATCCACACCAGCATTTCTATTGCATGCTTTATG TTGTGTCTGTCATGTACTTTTTTCGAGGATCATACCTATCTTTCCAACGGAAATATAATGGATGATTCCATCAGTCTTTA AGTGGAGATCACCACCTTCAGGCTTCGGCTATCTAGAACCTTTTATTCCCACGCCGGAGTTGGGCGGGGGGGGGGGGGGT CGATAGGAACCAGCATTAGTGAAGAAGAAAGACCGAGTTTGTTGAAGAAAAACTATTGAATCTTCTGGATATTGGAGAGG TCCAGGTCTCTATGAAGTTCTCAATTACAATACTGATCACAAGATGAAGTCCCTCTTTGGCTCTTTTATTTTCAGCATTC TCTCTCTTACTAACTTCATAATCTAACTAAAGACATTCCCAATTACAATACCGATTACAAGATGAAGTCCCTCTTTGGCT CTTTTATTTTCAACATTCTCTGTAGCACCTACAAAACCTTCAACTGGGTGGGATACCTGGTCACCCAATCTTAACATCTT ACAAGCTATAACTCCTGTAAGGCCCAATTCTTCTCATTTCTGGGCCTTGCTTGGTTTAGAAGAACTACAGACACATTCTT AATCTTAGGCTCTTAGCTCTTGCTCTCAATATGGTTAATTCCCTGTGTGTTAAGTGATCTCTATGCCCTGCTTCATTTCA ACCAATCCAATGGGTTTGGTCCCATTATTACAAAATCCTGACCAGTTTCCGCCGAACTGCCTTCTTAAGTTCTACCTGTT GGAATAACAGAATGAAATGGGGGGAGAGAGAGAGAGAGAGAGAGTAATCAGAATTTGTGCAATTGTGTTCTGTATTGAAT AATCTATTTGATATACAGAGGATAGCTCTTATATAGAAGATACATGTGATCGAAGCTAAGCGAATTAGTTTAGTAACCAA CAGTCATAGACAGCTGGCATAACTAACTAATCAATTACAAGAGAAGGAAATACAATGTTAACAAACCTATGCTAATGGAA AACAACAAGTTACACAATGCATAAAATACATATACTCTAATACTACCTTGGAGTTGCGGGATGGCCACCCTTTCAATCCC CTTCTCTTTCACCCATGTAACTTCTATGCATAACCTTTGTTGGAGATTCCAGCAGGAAACACTTTAGCTAAGATGTCCGA GTTCCTGAATCCTGTCACCGCTGATAAGCCATCGATTCGTGAGTTTGACCCGAGGTCCACCGGTTCTGGCAGTAGTTGTG GTGGAACACCCCCTCTTGTCCTCATCTCAACTAAGGCCTTGTTCTTGATCTTCATTTCTGAATTCTGATTCCCCTTCCTG TTCCAAGATTCTGATTCTCCCACTTCTTATTTCTCCTTGAGCTGTCTTCTGTTGCTTGCAAGCTCTTTCCTTATTTCTCC AATAAGGCTTCGTCTCTGAGTTCCCTTCTCCAAGCTGCAACCTCTTTCTTTATTTCTCAAAAAATGTCAAGAATTTCCTC CTTCATTTTGCTGACCCTGAGCAGCTCTGGTTTGGGTGGGGGCCCGCTGAAGAAGAAGAAGAAGAAGAAAGACTGAGTTT ATTGAAGAAAAAACAATGAATCTCCTTGATACTTGAGAGATCCAGGTCACTCCCAAGTTTTCGATTACAATACTGATCAA TCTGATTACAAGATAAAGTCTCTCTCCAACTCTTTTGTTATTTATAACATTCATCTCTCTCACTCTAACTTCCTAAACTT ACTGACTTAGGGGTTACCTATCAGTTTGGGGTGTAAGTTTACATTTTGGTTATTATGAGTTTGTTTCTACTTACATGTGG ATATAATATGCAACTTACACCTAAATCATATTATTATATGATAATATTATTATTTTGGTCCGAAAAGGCGATACATTCCT TAATTTGTTTATTCCTGTTTTATGTTTTTGCCTTCACTTCGGTGTTCACCAATGACCTGTTTCAAGAGTTCCCTTCTCTG ATATGCAGAAATATCTGGCAACTTTGTTGTGTTCTTGTTTTCTTTCTGTTTTTATTTTTCAACCTCTGGAGAATACTTTA CCCTCTTCATTTGACCATCATCCTATTCCCTCTAAAATGCTTCTGTGGTAGCAGTAAATGATTATTCTGTAGTTTACAGC TTACTTAGCATACAATACTTATTTATTTCTGGACATTGTATGCTTCGAATTTGAGTAATGAACTTTTGCTGCATTTGTTG CAGTGAGTTTGAGGAACTAGAAGCCGTGCCAACCATGGCAGTTATGGATGGTCCCCTTGAGCCATCATCATCTACTGCTT CCAATGTGGCTGATGTTGCTGATGATCCATCCTTTGTAAATTTCTTCAGTGTATGTACAGTACTGAACAACTTTATTTGC TTCTAATAATTTGTGAAAATCTCATAATCCTTTCCTCTTTCCGAACTCTTTAAAAATGATATGACATGTCATCGCAGTCA TAGTGGAGGTGTTTAATTTCTTGTATGCTTAGCTTGGTTGTGTGTCCATATTTGTAAAAACAGTTTCATCTGTATCCTAA TAGTCTTTTCTGCCAGTTGCTATTGGAGAATAAAGGAACTGAATTGAAATTATAAAATTATACTACTAATAGTCTTTATG GTGCTCCACTTATGATAAATTTTTTTGCAAATATGTATATGTAATATTCGGCACAATGGTATTGCCAATAATTTTTCATT GTAAGCGAGACATTTGTAATTCTATTCTGATCAGGTTGATTTTCCTGATACTTTATTAATGCAGGCAGCTTTGGGTATTG GGAATACTTCAAATGCTCCAATTACTGGACAACCTTATCAGTCTTCTGCTACAATACCTACGCCTCTTGTGCCAGCTCAT GCTGCTACACCCACTTTGCCAACCTTGCAGATACCCTCTCTTTCAGCATCTACACCTCTAATTCCTCAGCATGATGCTTC TGAGTCCTTCAGCAGCAGCAGCCGAACCACAAAGCTTGTGAACCCTTCTTCTTTTGTTGTCCCTCCCCCAACTTCATCAC CAGTCATCATTCCCCTGGTATCCTCATCTACACCTACTGCTCCTCCACTTCATCCTGCTGCTAGCCATCCGCGCCTGTAT GGTGCAGGCGATCGACTGCTACAACCATTTCCACCTCCAACTCCACCACCTTCACTTACGCCCACTTCTGCCCCCCTTCA AAACTATGGTCCAGTTATTTCTAGAGAAAAGGTCCGAGATGCTCTTCTGGTGCTTGTTCAGGTTAGTTTATTTGCTTAAT AATTGTGTGATATTCTTGTACAATGATCTTATATGACTATTAGGGAGCAAATCGTTTTCTTTGATCTCATCAGATTCTAT TCTTAACGAAGCATGTGTTAGAATGATTTTATTATTTTTCTTGTTTGTCCTCTCATTTTCTAATTCTGTTGTCTTTTTGG CTATATATAGGACAATCAATTCATTGATATGGTTTATAGAGCGCTGCTGAATACTCATCAATAATGACTTTCAAGAGGTG TTTAATTATCAACTCCCAGGAAGTACTGTTTTTTGGCTGAATTACATTTACTATATTTAGGCCAGGCTTTAATCATGTCA TGAACTTTAAACTGTCGTTCATTGTCAGTTTGTATAATTGGTTGTGCATTGTGATGACCGTTTTGATCTTTGCCAATTTC CTGAATGTCACCGTTTTTTTGCAAATAAACTACCATTCTTCAACTGTAATCCTGACATGACCAGGAAATGGTGAAGGTCC CGGTGATGGTTAGAGCAATATGGAACTGATTTTGCAAATTGTTATTGACAAACAGATCTCCAGACTATAGGGGTGGTAAG GTTGTTGTTGAGGGCCTTTGTTTATTGTGTATTTTATGAAATTGTCATATGTTAAGACCGAGTTTGCATAGCACCATCTG TCTGTTTCAATGAACATGGACTGCATAATGCAAGTATATAATTAGCCTTATTTTTTGATGAATTATGCAGCAATTGAGAA ACAATCTTCTGACTGAAACCAGTACTATTTCCCTGATATCGCATTTTTTGTTTGTGTATGCATCATTACTTAATGATGCT AATTGAACTTCTAACTAAACAACTGGTAAAACATTACTCAAACATTGAATGGACAAAATAAACTATGCCCAAAGTTCAAT TTTTATTCTAATTGTGCTTGAATAATTTGCAACTAAAACTCTTGACTCTTCCAGTCTCACACCATTCTTATATTCTTAGC TTAGGTAAGCTTTTATTGACGAACATTTCTACCATTGCTAACTAGCAAATTTCTGTTGATGAGTTCCGTGATTTTTTTTT GATAAGCCAAAGCATTGCATTCAACTAGCACAAGAGGTGCTAATCCAAATACAATGAGTAGTGGACTAGTAAAAAGAGAC TAACTAGATATACATAAAGGAAATTACATCAATAAAAAATCCATGACAGCAAGAGAAAAACCATAGAAACAGAAAAACAA TGCCAATCCAAAGACAACTTCCGTTCTAGAGGAATAGGAAAAATTCATCCCGCATGATCTCCAATTTCATAAAAGCATGC TTGCTGCTAATATATCTATCAATCTAAAGCGGTTGTTCATGGGTGATCATGGGTCATCTTCATCCAACCAACTTGACACG AGCTTAAAAAGGCGGGTTAGATTTAGTCAACAAGAAAAAAATGATTTCTTTTAATCACAGAACCTGATAACTTCAGGTTG AGTAACGAGTTAAGTAAATTTAAATTTGAATTGGATGCACACATGACTTTGCCAGTATATTAAAAA
CDS sequence (LotjaGi3g1v0180000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCAGAACGGGAAATTGATGCCGAATCTAGACCAGCAAAGCACCAAGGTTCTCAACCTCACTGTTCTCCAACGAAT CGACGCTTTCGTTGAGGAAATTCTCATCACCGCCGCACATGTCACCTTCTACGAGTTCAACATCGACCAAAGCCAATGGA GTCGCAAGGACGTTGAAGGATCGCTCTTTGTTGTTAAGAGGACTTCAAAACCGAGATTTCAGTTTATTGTGATGAACCGT CGCAATACCGAAAATTTGGTGGAGAATCTCCTGGAGGATTTCGAGTATGAAGTTCAGGTTCCGTATCTCCTGTATAGAAA TGCAGCTCAAGAAGTGAATGGCATCTGGTTCTATAATCCACGTGAATGTGAAGAGGTTGCAAATCTTTTTAGCAGGATCC TTAATACATTTGCCAAGGTGCCTCCAAAGTCAAAGTTATCCTCTACAAAGAGTGAGTTTGAGGAACTAGAAGCCGTGCCA ACCATGGCAGTTATGGATGGTCCCCTTGAGCCATCATCATCTACTGCTTCCAATGTGGCTGATGTTGCTGATGATCCATC CTTTGTAAATTTCTTCAGTGCAGCTTTGGGTATTGGGAATACTTCAAATGCTCCAATTACTGGACAACCTTATCAGTCTT CTGCTACAATACCTACGCCTCTTGTGCCAGCTCATGCTGCTACACCCACTTTGCCAACCTTGCAGATACCCTCTCTTTCA GCATCTACACCTCTAATTCCTCAGCATGATGCTTCTGAGTCCTTCAGCAGCAGCAGCCGAACCACAAAGCTTGTGAACCC TTCTTCTTTTGTTGTCCCTCCCCCAACTTCATCACCAGTCATCATTCCCCTGGTATCCTCATCTACACCTACTGCTCCTC CACTTCATCCTGCTGCTAGCCATCCGCGCCTGTATGGTGCAGGCGATCGACTGCTACAACCATTTCCACCTCCAACTCCA CCACCTTCACTTACGCCCACTTCTGCCCCCCTTCAAAACTATGGTCCAGTTATTTCTAGAGAAAAGGTCCGAGATGCTCT TCTGGTGCTTGTTCAGGACAATCAATTCATTGATATGGTTTATAGAGCGCTGCTGAATACTCATCAATAA
Protein sequence (LotjaGi3g1v0180000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQNGKLMPNLDQQSTKVLNLTVLQRIDAFVEEILITAAHVTFYEFNIDQSQWSRKDVEGSLFVVKRTSKPRFQFIVMNR RNTENLVENLLEDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECEEVANLFSRILNTFAKVPPKSKLSSTKSEFEELEAVP TMAVMDGPLEPSSSTASNVADVADDPSFVNFFSAALGIGNTSNAPITGQPYQSSATIPTPLVPAHAATPTLPTLQIPSLS ASTPLIPQHDASESFSSSSRTTKLVNPSSFVVPPPTSSPVIIPLVSSSTPTAPPLHPAASHPRLYGAGDRLLQPFPPPTP PPSLTPTSAPLQNYGPVISREKVRDALLVLVQDNQFIDMVYRALLNTHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 368 | 368 | 5.6E-178 | – | |
| PANTHER | 1 | 368 | 368 | 5.6E-178 | ||
| Gene3D | 6 | 137 | 132 | 2.7E-47 | ||
| Pfam | 17 | 131 | 115 | 3.2E-42 | ||
| CDD | 19 | 134 | 116 | 4.65843E-61 | – | |
| SUPERFAMILY | 19 | 137 | 119 | 6.39E-45 | – | |
| MobiDBLite | 311 | 331 | 21 | - | – | |
| MobiDBLite | 313 | 327 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Deadenylation-dependent decapping of nuclear-transcribed mRNA | Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length. | ||
| Molecular function | Enzyme activator activity | Binds to and increases the activity of an enzyme. | ||
| Biological process | Positive regulation of catalytic activity | Any process that activates or increases the activity of an enzyme. |
Expression pattern of LotjaGi3g1v0180000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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