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GO:0005666

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description RNA polymerase III complex
Full defintion RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.
Subterm of

Relationships

The relationship of GO:0005666 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0005666, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmtg_sensu

Associated Lotus transcripts 12

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj1g3v3103950.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine max] gi|356567166|ref|XP_003551792.1|
GO terms
2
Lj3g3v3725520.1
– Os04g0394500 [Oryza sativa Japonica Group] gi|297602633|ref|NP_001052654.2|
GO terms
3
Lj4g3v2180370.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Cicer arietinum] gi|502116752|ref|XP_004495578.1|
GO terms
3
Lj4g3v2180370.2
– PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Cicer arietinum] gi|502116752|ref|XP_004495578.1|
GO terms
3
LotjaGi1g1v0524000.1
– DNA-directed RNA polymerase III subunit RPC6; TAIR: AT5G23710.1 DNA binding / DNA-directed RNA polymerase; Swiss-Prot: sp|O94553|RPC6_SCHPO Probable DNA-directed RNA polymerase III subunit rpc6; TrEMBL-Plants: tr|I3SJX0|I3SJX0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0524000
GO terms
2
LotjaGi2g1v0391900_LC.1
– DNA-directed RNA polymerase III subunit RPC4; TAIR: AT4G25180.1 RNA polymerase III RPC4; Swiss-Prot: sp|P05423|RPC4_HUMAN DNA-directed RNA polymerase III subunit RPC4; TrEMBL-Plants: tr|A0A151TLI3|A0A151TLI3_CAJCA DNA-directed RNA polymerase III subunit RPC4; Found in the gene: LotjaGi2g1v0391900_LC
GO terms
3
LotjaGi2g1v0392200_LC.1
– DNA-directed RNA polymerase III subunit RPC4; TAIR: AT4G25180.1 RNA polymerase III RPC4; Swiss-Prot: sp|P05423|RPC4_HUMAN DNA-directed RNA polymerase III subunit RPC4; TrEMBL-Plants: tr|A0A151TLI3|A0A151TLI3_CAJCA DNA-directed RNA polymerase III subunit RPC4; Found in the gene: LotjaGi2g1v0392200_LC
GO terms
3
LotjaGi4g1v0326400.1
– DNA-directed RNA polymerase III subunit RPC4; TAIR: AT5G09380.2 RNA polymerase III RPC4; Swiss-Prot: sp|Q5E9Z7|RPC4_BOVIN DNA-directed RNA polymerase III subunit RPC4; TrEMBL-Plants: tr|I1MSB8|I1MSB8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0326400
GO terms
3
LotjaGi5g1v0155200.1
– RNA polymerase II, Rpb4, core protein; TAIR: AT5G62950.1 RNA polymerase II, Rpb4, core protein; Swiss-Prot: sp|O35427|RPC9_MOUSE DNA-directed RNA polymerase III subunit RPC9; TrEMBL-Plants: tr|I3SAG6|I3SAG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0155200
GO terms
2
LotjaGi5g1v0155200.2
– RNA polymerase II, Rpb4, core protein; TAIR: AT5G62950.1 RNA polymerase II, Rpb4, core protein; Swiss-Prot: sp|O35427|RPC9_MOUSE DNA-directed RNA polymerase III subunit RPC9; TrEMBL-Plants: tr|I3SAG6|I3SAG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0155200
GO terms
2
LotjaGi5g1v0300000.1
– DNA-directed RNA polymerase III subunit RPC3; TAIR: AT3G49000.1 RNA polymerase III subunit RPC82 family protein; Swiss-Prot: sp|Q9BUI4|RPC3_HUMAN DNA-directed RNA polymerase III subunit RPC3; TrEMBL-Plants: tr|V7BC56|V7BC56_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0300000
GO terms
2
LotjaGi6g1v0059100.1
– RNA polymerase II, Rpb4, core protein; TAIR: AT5G62950.1 RNA polymerase II, Rpb4, core protein; Swiss-Prot: sp|A0JN61|RPC9_BOVIN DNA-directed RNA polymerase III subunit RPC9; TrEMBL-Plants: tr|I3SAG6|I3SAG6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0059100
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006384
Biological process Transcription initiation from RNA polymerase III promoter 1 8.33