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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0019219 |
| Transcript ID | Lj0g3v0019219.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163082|ref|XP_004512719.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| PANTHER | 18 | 543 | 526 | 1.40E-257 | – | |
| PANTHER | 18 | 543 | 526 | 1.40E-257 | – | |
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 543 | 516 | – | – | |
| Pfam | 88 | 136 | 49 | 6.00E-11 | ||
| ProSiteProfiles | 89 | 123 | 35 | 9.229 | ||
| TIGRFAM | 91 | 125 | 35 | 6.20E-05 | ||
| ProSiteProfiles | 124 | 158 | 35 | 10.326 | ||
| TIGRFAM | 126 | 159 | 34 | 3.10E-05 | ||
| Pfam | 154 | 185 | 32 | 1.00E-06 | ||
| ProSiteProfiles | 159 | 189 | 31 | 8.692 | ||
| TIGRFAM | 163 | 187 | 25 | 9.70E-04 | ||
| Pfam | 194 | 242 | 49 | 9.20E-19 | ||
| ProSiteProfiles | 195 | 229 | 35 | 12.748 | ||
| TIGRFAM | 197 | 231 | 35 | 7.60E-11 | ||
| ProSiteProfiles | 230 | 264 | 35 | 11.992 | ||
| TIGRFAM | 232 | 266 | 35 | 2.10E-07 | ||
| SUPERFAMILY | 259 | 330 | 72 | 1.23E-06 | – | |
| Pfam | 261 | 292 | 32 | 2.50E-12 | ||
| ProSiteProfiles | 265 | 299 | 35 | 12.189 | ||
| TIGRFAM | 267 | 300 | 34 | 1.80E-08 | ||
| Pfam | 300 | 348 | 49 | 4.50E-16 | ||
| ProSiteProfiles | 300 | 334 | 35 | 11.718 | ||
| TIGRFAM | 302 | 336 | 35 | 2.10E-08 | ||
| ProSiteProfiles | 335 | 369 | 35 | 12.419 | ||
| TIGRFAM | 338 | 371 | 34 | 1.10E-10 | ||
| Pfam | 366 | 397 | 32 | 4.10E-10 | ||
| ProSiteProfiles | 370 | 404 | 35 | 11.509 | ||
| TIGRFAM | 372 | 405 | 34 | 6.90E-09 | ||
| Gene3D | 404 | 538 | 135 | 4.30E-05 | ||
| SUPERFAMILY | 404 | 505 | 102 | 1.23E-06 | – | |
| ProSiteProfiles | 405 | 439 | 35 | 12.244 | ||
| Pfam | 405 | 453 | 49 | 9.10E-18 | ||
| TIGRFAM | 407 | 440 | 34 | 6.20E-08 | ||
| ProSiteProfiles | 440 | 474 | 35 | 11.301 | ||
| TIGRFAM | 442 | 475 | 34 | 2.90E-06 | ||
| Pfam | 475 | 521 | 47 | 7.20E-16 | ||
| ProSiteProfiles | 475 | 509 | 35 | 14.853 | ||
| TIGRFAM | 478 | 511 | 34 | 1.30E-12 | ||
| ProSiteProfiles | 510 | 543 | 34 | 9.887 | ||
| TIGRFAM | 512 | 542 | 31 | 0.0015 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0019219.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0019219.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.