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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0021199 |
| Transcript ID | Lj0g3v0021199.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR5-like isoform X1 [Cicer arietinum] gi|502129218|ref|XP_004500227.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 236 | 236 | 7.40E-176 | ||
| Pfam | 1 | 196 | 196 | 7.00E-55 | ||
| Phobius | 1 | 16 | 16 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 236 | 236 | 7.40E-176 | – | |
| TMHMM | 2 | 24 | 23 | – | – | |
| SUPERFAMILY | 3 | 233 | 231 | 1.70E-08 | ||
| Phobius | 4 | 11 | 8 | – | – | |
| Phobius | 12 | 16 | 5 | – | – | |
| Phobius | 17 | 39 | 23 | – | – | |
| Phobius | 40 | 63 | 24 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 64 | 83 | 20 | – | – | |
| Phobius | 84 | 104 | 21 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 105 | 123 | 19 | – | – | |
| Phobius | 124 | 143 | 20 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 144 | 163 | 20 | – | – | |
| TMHMM | 162 | 184 | 23 | – | – | |
| Phobius | 164 | 187 | 24 | – | – | |
| Phobius | 188 | 206 | 19 | – | – | |
| Phobius | 207 | 226 | 20 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 227 | 240 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0021199.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0021199.1, powered by CORGI.
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