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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0060629 |
| Transcript ID | Lj0g3v0060629.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-galactosidase 1-like [Glycine max] gi|356526021|ref|XP_003531618.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 32 | 32 | – | – | |
| ProSiteProfiles | 1 | 24 | 24 | 5 | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 14 | 14 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| PANTHER | 9 | 268 | 260 | 1.50E-219 | – | |
| PANTHER | 9 | 268 | 260 | 1.50E-219 | ||
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 15 | 27 | 13 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Gene3D | 31 | 268 | 238 | 1.30E-92 | ||
| Phobius | 33 | 268 | 236 | – | – | |
| SUPERFAMILY | 34 | 268 | 235 | 1.97E-74 | ||
| Pfam | 41 | 268 | 228 | 1.40E-83 | ||
| PRINTS | 44 | 61 | 18 | 1.30E-48 | ||
| PRINTS | 65 | 83 | 19 | 1.30E-48 | ||
| PRINTS | 120 | 139 | 20 | 1.30E-48 | ||
| PRINTS | 177 | 192 | 16 | 1.30E-48 | ||
| ProSitePatterns | 179 | 191 | 13 | – | ||
| PRINTS | 256 | 268 | 13 | 1.30E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj0g3v0060629.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0060629.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.