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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0062549 |
| Transcript ID | Lj0g3v0062549.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | mitochondrial cytochrome c oxidase subunit II (mitochondrion) [Vicia faba] gi|442803102|gb|AGC78837.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 3 | 252 | 250 | 8.40E-162 | – | |
| Phobius | 3 | 10 | 8 | – | – | |
| PANTHER | 3 | 252 | 250 | 8.40E-162 | – | |
| SUPERFAMILY | 6 | 109 | 104 | 5.56E-32 | ||
| Phobius | 11 | 15 | 5 | – | – | |
| ProSiteProfiles | 15 | 110 | 96 | 24.037 | ||
| Gene3D | 16 | 104 | 89 | 4.10E-36 | ||
| Phobius | 16 | 40 | 25 | – | – | |
| Pfam | 16 | 102 | 87 | 1.40E-29 | ||
| TIGRFAM | 27 | 245 | 219 | 6.80E-46 | ||
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 41 | 61 | 21 | – | – | |
| Phobius | 62 | 81 | 20 | – | – | |
| PRINTS | 76 | 88 | 13 | 1.90E-61 | – | |
| Phobius | 82 | 104 | 23 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| PRINTS | 88 | 108 | 21 | 1.90E-61 | – | |
| Phobius | 105 | 257 | 153 | – | – | |
| Gene3D | 105 | 251 | 147 | 6.90E-54 | ||
| PRINTS | 111 | 130 | 20 | 1.90E-61 | – | |
| SUPERFAMILY | 112 | 250 | 139 | 8.12E-50 | ||
| ProSiteProfiles | 112 | 250 | 139 | 45.153 | ||
| CDD | 113 | 244 | 132 | 1.29E-84 | – | |
| Pfam | 115 | 239 | 125 | 7.50E-60 | ||
| PRINTS | 159 | 180 | 22 | 1.90E-61 | – | |
| PRINTS | 183 | 203 | 21 | 1.90E-61 | – | |
| PRINTS | 203 | 220 | 18 | 1.90E-61 | – | |
| PRINTS | 221 | 238 | 18 | 1.90E-61 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cytochrome-c oxidase activity | Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O. | ||
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Electron transport chain | A process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of Lj0g3v0062549.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0062549.1, powered by CORGI.
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