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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0067579 |
| Transcript ID | Lj0g3v0067579.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] gi|356516750|ref|XP_003527056.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 772 | 772 | 0 | – | |
| Phobius | 1 | 64 | 64 | – | – | |
| PANTHER | 1 | 772 | 772 | 0 | – | |
| SMART | 17 | 89 | 73 | 4.30E-21 | ||
| SUPERFAMILY | 17 | 134 | 118 | 8.89E-83 | – | |
| Pfam | 20 | 83 | 64 | 1.10E-13 | ||
| Gene3D | 34 | 68 | 35 | 3.90E-41 | ||
| TIGRFAM | 36 | 795 | 760 | 0 | ||
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 65 | 88 | 24 | – | – | |
| Gene3D | 69 | 128 | 60 | 2.00E-22 | ||
| Phobius | 89 | 99 | 11 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 100 | 116 | 17 | – | – | |
| Pfam | 102 | 322 | 221 | 4.10E-60 | ||
| TIGRFAM | 103 | 367 | 265 | 5.80E-38 | ||
| Phobius | 117 | 245 | 129 | – | – | |
| Gene3D | 129 | 231 | 103 | 3.90E-41 | ||
| SUPERFAMILY | 134 | 231 | 98 | 9.68E-29 | – | |
| PRINTS | 181 | 195 | 15 | 6.20E-42 | – | |
| SUPERFAMILY | 231 | 325 | 95 | 8.89E-83 | – | |
| TMHMM | 244 | 266 | 23 | – | – | |
| Phobius | 246 | 269 | 24 | – | – | |
| Gene3D | 247 | 347 | 101 | 2.00E-22 | ||
| Phobius | 270 | 280 | 11 | – | – | |
| Phobius | 281 | 303 | 23 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 304 | 648 | 345 | – | – | |
| Pfam | 327 | 604 | 278 | 1.80E-16 | – | |
| SUPERFAMILY | 327 | 383 | 57 | 1.80E-37 | ||
| PRINTS | 331 | 345 | 15 | 6.20E-42 | – | |
| ProSitePatterns | 333 | 339 | 7 | – | ||
| Gene3D | 348 | 489 | 142 | 7.30E-32 | ||
| SUPERFAMILY | 410 | 637 | 228 | 1.80E-37 | ||
| PRINTS | 447 | 465 | 19 | 1.60E-58 | ||
| PRINTS | 485 | 496 | 12 | 6.20E-42 | – | |
| PRINTS | 507 | 517 | 11 | 6.20E-42 | – | |
| Gene3D | 557 | 834 | 278 | 1.70E-87 | ||
| PRINTS | 562 | 578 | 17 | 1.60E-58 | ||
| TIGRFAM | 565 | 678 | 114 | 3.00E-27 | ||
| PRINTS | 590 | 609 | 20 | 6.20E-42 | – | |
| PRINTS | 590 | 606 | 17 | 1.60E-58 | ||
| PRINTS | 613 | 625 | 13 | 6.20E-42 | – | |
| PRINTS | 621 | 646 | 26 | 1.60E-58 | ||
| SUPERFAMILY | 639 | 836 | 198 | 8.89E-83 | – | |
| Phobius | 649 | 671 | 23 | – | – | |
| TMHMM | 649 | 671 | 23 | – | – | |
| Phobius | 672 | 676 | 5 | – | – | |
| Phobius | 677 | 694 | 18 | – | – | |
| Phobius | 695 | 700 | 6 | – | – | |
| TMHMM | 696 | 718 | 23 | – | – | |
| Phobius | 701 | 719 | 19 | – | – | |
| Phobius | 720 | 743 | 24 | – | – | |
| TMHMM | 744 | 761 | 18 | – | – | |
| Phobius | 744 | 763 | 20 | – | – | |
| PRINTS | 749 | 770 | 22 | 1.60E-58 | ||
| Phobius | 764 | 774 | 11 | – | – | |
| Phobius | 775 | 798 | 24 | – | – | |
| TMHMM | 776 | 798 | 23 | – | – | |
| Phobius | 799 | 809 | 11 | – | – | |
| TMHMM | 805 | 827 | 23 | – | – | |
| PANTHER | 809 | 912 | 104 | 0 | – | |
| PANTHER | 809 | 912 | 104 | 0 | – | |
| Phobius | 810 | 832 | 23 | – | – | |
| Phobius | 833 | 939 | 107 | – | – | |
| Coils | 890 | 910 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of Lj0g3v0067579.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0067579.2, powered by CORGI.
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