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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0071849 |
| Transcript ID | Lj0g3v0071849.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: SPX domain-containing membrane protein At4g22990-like [Cicer arietinum] gi|502180691|ref|XP_004516695.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 325 | 325 | 9.90E-197 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 325 | 325 | 9.90E-197 | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Pfam | 2 | 267 | 266 | 2.00E-10 | ||
| Phobius | 3 | 14 | 12 | – | – | |
| SUPERFAMILY | 5 | 76 | 72 | 2.22E-14 | ||
| TMHMM | 5 | 27 | 23 | – | – | |
| Gene3D | 7 | 74 | 68 | 1.90E-04 | – | |
| Phobius | 15 | 22 | 8 | – | – | |
| Phobius | 23 | 40 | 18 | – | – | |
| Phobius | 41 | 59 | 19 | – | – | |
| TMHMM | 42 | 61 | 20 | – | – | |
| Phobius | 60 | 140 | 81 | – | – | |
| SUPERFAMILY | 117 | 294 | 178 | 2.22E-14 | ||
| Gene3D | 135 | 276 | 142 | 6.30E-04 | – | |
| Phobius | 141 | 166 | 26 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| Phobius | 167 | 171 | 5 | – | – | |
| Phobius | 172 | 192 | 21 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 193 | 203 | 11 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 204 | 223 | 20 | – | – | |
| Phobius | 224 | 228 | 5 | – | – | |
| Phobius | 229 | 253 | 25 | – | – | |
| TMHMM | 231 | 253 | 23 | – | – | |
| Phobius | 254 | 297 | 44 | – | – | |
| Phobius | 298 | 322 | 25 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 323 | 325 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0071849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0071849.1, powered by CORGI.
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