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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0071849 |
| Transcript ID | Lj0g3v0071849.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: SPX domain-containing membrane protein At4g22990-like [Cicer arietinum] gi|502180691|ref|XP_004516695.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 249 | 249 | – | – | |
| PANTHER | 2 | 695 | 694 | 0 | – | |
| PANTHER | 2 | 695 | 694 | 0 | – | |
| ProSiteProfiles | 2 | 145 | 144 | 22.115 | ||
| CDD | 2 | 141 | 140 | 3.38E-85 | – | |
| Pfam | 109 | 145 | 37 | 2.10E-06 | ||
| TMHMM | 249 | 271 | 23 | – | – | |
| SUPERFAMILY | 249 | 446 | 198 | 2.35E-30 | ||
| Phobius | 250 | 268 | 19 | – | – | |
| Gene3D | 251 | 444 | 194 | 2.30E-22 | – | |
| Pfam | 256 | 637 | 382 | 2.40E-24 | ||
| CDD | 257 | 431 | 175 | 8.90E-16 | ||
| Phobius | 269 | 279 | 11 | – | – | |
| Phobius | 280 | 303 | 24 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 304 | 314 | 11 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 315 | 332 | 18 | – | – | |
| Phobius | 333 | 337 | 5 | – | – | |
| TMHMM | 336 | 353 | 18 | – | – | |
| Phobius | 338 | 356 | 19 | – | – | |
| Phobius | 357 | 376 | 20 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 377 | 399 | 23 | – | – | |
| Phobius | 400 | 410 | 11 | – | – | |
| TMHMM | 410 | 429 | 20 | – | – | |
| Phobius | 411 | 429 | 19 | – | – | |
| Phobius | 430 | 510 | 81 | – | – | |
| SUPERFAMILY | 487 | 661 | 175 | 2.35E-30 | ||
| Phobius | 511 | 536 | 26 | – | – | |
| TMHMM | 511 | 533 | 23 | – | – | |
| Phobius | 537 | 541 | 5 | – | – | |
| Phobius | 542 | 562 | 21 | – | – | |
| TMHMM | 543 | 565 | 23 | – | – | |
| Phobius | 563 | 573 | 11 | – | – | |
| Phobius | 574 | 593 | 20 | – | – | |
| TMHMM | 574 | 596 | 23 | – | – | |
| Phobius | 594 | 598 | 5 | – | – | |
| Phobius | 599 | 623 | 25 | – | – | |
| TMHMM | 601 | 623 | 23 | – | – | |
| Phobius | 624 | 667 | 44 | – | – | |
| TMHMM | 668 | 690 | 23 | – | – | |
| Phobius | 668 | 692 | 25 | – | – | |
| Phobius | 693 | 695 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0071849.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0071849.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.