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Lj0g3v0073579.2

Overview

Field Value
Gene ID Lj0g3v0073579
Transcript ID Lj0g3v0073579.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502096414|ref|XP_004490730.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 36 36
SignalP 1 36 36
Phobius 1 20 20
SignalP 1 35 35
Phobius 21 32 12
PANTHER 29 190 162 1.50E-76
PANTHER 29 190 162 1.50E-76
Phobius 33 36 4
Phobius 37 363 327
SUPERFAMILY 40 299 260 3.88E-37
Gene3D 40 294 255 2.90E-48
Pfam 42 81 40 6.10E-09
Gene3D 295 356 62 1.10E-09

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj0g3v0073579.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0073579.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.