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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0076569 |
| Transcript ID | Lj0g3v0076569.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like [Cicer arietinum] gi|502096635|ref|XP_004490797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 94 | 236 | 143 | 0 | – | |
| PANTHER | 94 | 236 | 143 | 0 | – | |
| ProSiteProfiles | 138 | 172 | 35 | 9.01 | ||
| ProSiteProfiles | 173 | 207 | 35 | 10.326 | ||
| TIGRFAM | 176 | 209 | 34 | 1.20E-06 | ||
| Pfam | 176 | 205 | 30 | 9.50E-05 | ||
| ProSiteProfiles | 208 | 242 | 35 | 5.645 | ||
| Gene3D | 298 | 332 | 35 | 1.20E-12 | ||
| PANTHER | 299 | 461 | 163 | 0 | – | |
| PANTHER | 299 | 461 | 163 | 0 | – | |
| ProSiteProfiles | 301 | 335 | 35 | 11.466 | ||
| TIGRFAM | 304 | 336 | 33 | 4.40E-09 | ||
| Pfam | 304 | 344 | 41 | 3.40E-12 | ||
| ProSiteProfiles | 336 | 370 | 35 | 10.008 | ||
| TIGRFAM | 338 | 372 | 35 | 1.10E-04 | ||
| Gene3D | 369 | 423 | 55 | 1.20E-12 | ||
| Pfam | 370 | 418 | 49 | 3.10E-10 | ||
| ProSiteProfiles | 371 | 405 | 35 | 11.531 | ||
| TIGRFAM | 374 | 407 | 34 | 3.10E-07 | ||
| ProSiteProfiles | 406 | 440 | 35 | 9.679 | ||
| TIGRFAM | 408 | 442 | 35 | 2.90E-04 | ||
| ProSiteProfiles | 441 | 471 | 31 | 5.229 | ||
| ProSiteProfiles | 475 | 510 | 36 | 6.686 | ||
| PANTHER | 510 | 748 | 239 | 0 | – | |
| PANTHER | 510 | 748 | 239 | 0 | – | |
| ProSiteProfiles | 511 | 545 | 35 | 11.389 | ||
| Pfam | 513 | 557 | 45 | 6.20E-09 | ||
| TIGRFAM | 515 | 542 | 28 | 3.70E-06 | ||
| ProSiteProfiles | 546 | 580 | 35 | 10.205 | ||
| TIGRFAM | 549 | 580 | 32 | 2.60E-05 | ||
| ProSiteProfiles | 581 | 615 | 35 | 10.841 | ||
| Gene3D | 584 | 746 | 163 | 1.20E-12 | ||
| TIGRFAM | 584 | 617 | 34 | 7.00E-08 | ||
| Pfam | 599 | 682 | 84 | 6.50E-07 | ||
| ProSiteProfiles | 616 | 650 | 35 | 11.4 | ||
| TIGRFAM | 619 | 651 | 33 | 3.10E-07 | ||
| ProSiteProfiles | 651 | 681 | 31 | 9.164 | ||
| TIGRFAM | 654 | 680 | 27 | 1.00E-04 | ||
| ProSiteProfiles | 686 | 716 | 31 | 7.509 | ||
| Pfam | 688 | 717 | 30 | 0.071 | ||
| ProSiteProfiles | 720 | 754 | 35 | 9.416 | ||
| Pfam | 722 | 752 | 31 | 0.0038 | ||
| ProSiteProfiles | 755 | 789 | 35 | 8.89 | ||
| TIGRFAM | 757 | 790 | 34 | 7.40E-04 | ||
| Pfam | 757 | 785 | 29 | 0.33 | ||
| PANTHER | 854 | 899 | 46 | 0 | – | |
| PANTHER | 854 | 899 | 46 | 0 | – | |
| ProSiteProfiles | 858 | 892 | 35 | 11.104 | ||
| TIGRFAM | 860 | 893 | 34 | 4.50E-06 | ||
| Pfam | 861 | 888 | 28 | 0.0011 | ||
| ProSiteProfiles | 893 | 927 | 35 | 7.936 | ||
| ProSiteProfiles | 928 | 958 | 31 | 6.38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0076569.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0076569.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.