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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0076569 |
| Transcript ID | Lj0g3v0076569.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like [Cicer arietinum] gi|502096635|ref|XP_004490797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 134 | 134 | 2.70E-226 | – | |
| PANTHER | 1 | 134 | 134 | 2.70E-226 | – | |
| ProSiteProfiles | 9 | 43 | 35 | 10.008 | ||
| TIGRFAM | 11 | 45 | 35 | 6.50E-05 | ||
| Pfam | 11 | 41 | 31 | 0.0067 | ||
| Pfam | 43 | 91 | 49 | 1.80E-10 | ||
| ProSiteProfiles | 44 | 78 | 35 | 11.531 | ||
| TIGRFAM | 47 | 80 | 34 | 1.80E-07 | ||
| Gene3D | 52 | 94 | 43 | 6.20E-12 | ||
| ProSiteProfiles | 79 | 113 | 35 | 9.679 | ||
| TIGRFAM | 81 | 115 | 35 | 1.70E-04 | ||
| ProSiteProfiles | 114 | 144 | 31 | 5.229 | ||
| Gene3D | 129 | 201 | 73 | 6.20E-12 | ||
| ProSiteProfiles | 148 | 183 | 36 | 6.686 | ||
| PANTHER | 183 | 421 | 239 | 2.70E-226 | – | |
| PANTHER | 183 | 421 | 239 | 2.70E-226 | – | |
| ProSiteProfiles | 184 | 218 | 35 | 11.389 | ||
| TIGRFAM | 188 | 215 | 28 | 2.20E-06 | ||
| Pfam | 199 | 290 | 92 | 8.60E-11 | ||
| ProSiteProfiles | 219 | 253 | 35 | 10.205 | ||
| TIGRFAM | 222 | 253 | 32 | 1.50E-05 | ||
| ProSiteProfiles | 254 | 288 | 35 | 10.841 | ||
| Gene3D | 257 | 419 | 163 | 6.20E-12 | ||
| TIGRFAM | 257 | 290 | 34 | 4.10E-08 | ||
| ProSiteProfiles | 289 | 323 | 35 | 11.4 | ||
| Pfam | 292 | 321 | 30 | 1.70E-06 | ||
| TIGRFAM | 292 | 324 | 33 | 1.80E-07 | ||
| ProSiteProfiles | 324 | 354 | 31 | 9.164 | ||
| Pfam | 326 | 353 | 28 | 4.10E-04 | ||
| TIGRFAM | 327 | 353 | 27 | 6.20E-05 | ||
| ProSiteProfiles | 359 | 389 | 31 | 7.509 | ||
| Pfam | 361 | 390 | 30 | 0.042 | ||
| ProSiteProfiles | 393 | 427 | 35 | 9.416 | ||
| Pfam | 395 | 425 | 31 | 0.0023 | ||
| ProSiteProfiles | 428 | 462 | 35 | 8.89 | ||
| TIGRFAM | 430 | 463 | 34 | 4.30E-04 | ||
| Pfam | 430 | 458 | 29 | 0.2 | ||
| PANTHER | 527 | 572 | 46 | 2.70E-226 | – | |
| PANTHER | 527 | 572 | 46 | 2.70E-226 | – | |
| ProSiteProfiles | 531 | 565 | 35 | 11.104 | ||
| TIGRFAM | 533 | 566 | 34 | 2.70E-06 | ||
| Pfam | 534 | 561 | 28 | 6.60E-04 | ||
| ProSiteProfiles | 566 | 600 | 35 | 7.936 | ||
| ProSiteProfiles | 601 | 631 | 31 | 6.38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0076569.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0076569.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.