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Lj0g3v0080819.1

Overview

Field Value
Gene ID Lj0g3v0080819
Transcript ID Lj0g3v0080819.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao] gi|508709082|gb|EOY00979.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 119 475 357 3.40E-231
PANTHER 119 475 357 3.40E-231
Gene3D 183 369 187 1.10E-41
SUPERFAMILY 186 368 183 1.16E-17
SMART 197 341 145 1.60E-04
PRINTS 198 215 18 4.20E-10
CDD 200 368 169 1.12E-50
PRINTS 225 236 12 4.20E-10
Pfam 230 365 136 8.10E-11
PRINTS 319 329 11 4.20E-10

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.

Expression data

Expression pattern

Expression pattern of Lj0g3v0080819.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0080819.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.