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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0091679 |
| Transcript ID | Lj0g3v0091679.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptidyl-prolyl isomerase PASTICCINO1-like [Glycine max] gi|356504332|ref|XP_003520950.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 112 | 111 | 3.80E-21 | – | |
| SUPERFAMILY | 5 | 116 | 112 | 2.75E-19 | – | |
| Pfam | 14 | 110 | 97 | 2.50E-12 | ||
| ProSiteProfiles | 17 | 113 | 97 | 15.053 | ||
| PANTHER | 55 | 568 | 514 | 9.60E-273 | ||
| PANTHER | 55 | 568 | 514 | 9.60E-273 | ||
| SUPERFAMILY | 116 | 226 | 111 | 1.30E-14 | – | |
| Gene3D | 117 | 230 | 114 | 2.80E-18 | – | |
| Pfam | 141 | 223 | 83 | 1.80E-05 | ||
| ProSiteProfiles | 141 | 227 | 87 | 8.842 | ||
| Gene3D | 231 | 355 | 125 | 3.00E-22 | – | |
| SUPERFAMILY | 232 | 355 | 124 | 1.20E-21 | – | |
| ProSiteProfiles | 258 | 350 | 93 | 17.241 | ||
| Pfam | 259 | 347 | 89 | 7.30E-14 | ||
| SUPERFAMILY | 364 | 506 | 143 | 6.48E-27 | ||
| Gene3D | 365 | 510 | 146 | 1.50E-28 | ||
| SMART | 367 | 400 | 34 | 160 | ||
| ProSiteProfiles | 367 | 400 | 34 | 6.599 | ||
| ProSiteProfiles | 367 | 400 | 34 | 6.048 | ||
| SMART | 416 | 449 | 34 | 0.011 | ||
| ProSiteProfiles | 416 | 449 | 34 | 7.582 | ||
| ProSiteProfiles | 416 | 483 | 68 | 15.964 | ||
| ProSiteProfiles | 450 | 483 | 34 | 9.44 | ||
| SMART | 450 | 483 | 34 | 0.015 | ||
| Pfam | 451 | 474 | 24 | 0.019 | ||
| Coils | 484 | 507 | 24 | – | – | |
| MobiDBLite | 520 | 559 | 40 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. | ||
| Biological process | Very long-chain fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid which has a chain length greater than C22. | ||
| Biological process | Plant organ development | Development of a plant organ, a multi-tissue plant structure that forms a functional unit. |
Expression pattern of Lj0g3v0091679.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0091679.1, powered by CORGI.
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