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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0099779 |
| Transcript ID | Lj0g3v0099779.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | tRNA nucleotidyltransferase [Lupinus albus] gi|1139585|gb|AAB03077.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| Phobius | 15 | 22 | 8 | – | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| PANTHER | 29 | 94 | 66 | 3.30E-20 | – | |
| PANTHER | 29 | 94 | 66 | 3.30E-20 | – | |
| Phobius | 31 | 138 | 108 | – | – | |
| Gene3D | 36 | 99 | 64 | 3.10E-12 | – | |
| SUPERFAMILY | 38 | 100 | 63 | 9.26E-10 | – | |
| Pfam | 41 | 100 | 60 | 1.10E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of Lj0g3v0099779.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0099779.1, powered by CORGI.
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